Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0181 ATGAAGTCCAATCCCGAATCAGAATCGCCACACTTGTTATTCCCCATCCTCTCCCTGTTGTTCCTCCCGTGTCTATCCATGTCCTCACCCTTCTCCACAAACGTCCTCACCCACCAATTCAAAGAAGCCCCTCAATTCTACAACTCCCCAAACTGCCCCTCCATGTCGGACCCACGCATCTGCTCCGAGGAAGCCGTCCACGTCGCAATGACGCTCGACACGACATACATCCGAGGCTCCATGGCCGCCGTCCTCTCGGTCCTCCAACACTCCTCCTGCCCGGAGAACACCTTCTTCCACTTCGTCTCCTCCTCCGACGCCTCCCTCCTCCGCAAAACGCTCTCCGCCACCTTCCCCTACCTCAACTTCCAACTCTACCACTTCGACGACGCCGTCGTTTCGGGGCTCATCTCCACCTCCATCCGCTCCGCGCTCGACTGCCCCCTCAACTACGCCCGCACCTACTTGCCAAAACTCCTCCCGCCCTGCGTCAAGCGCGTCGTCTACCTCGACTCCGACCTCGTCCTGGTCGACGACATTGCCAAACTCGCGACGACCCCGCTGGGGGAAAACCACGTCCTGGCGGCTCCCGAGTACTGCAACGCGAATCTCACCTCCTACTTCACGCCGTCGTTTTGGTCCAACCCGTCGCTGTCGCTGACGTTCGCGGACCGAAGGGCGTGCTACTTCAACACGGGGGTGATGGTCATCGATCTGGAGCGGTGGCGTGCGGGGGACTACACGGCCAAGATCGAGGAGTGGATGGAGCTTCAGAAGAGGGTCAGAATCTACGAGCTGGGTTCGTTGCCGCCGTTTTTGCTCGTCTTTGCGGGGAACATTGTTCCCGTGGATCACAGGTGGAACCAACACGGTCTCGGAGGGGACAATTTTCGTGGACTGTGTAGGGATCTGCACCCCGGCCCCGTTAGTTTGTTGCATTGGAGTGGCAAGGGTAAGCCGTGGGTTCGATTGGACGCTAACAGGCCTTGTCCTTTGGATGCACTTTGGGCACCTTATGATCTATTGCACACCCCATTCTCTTTCGACTcatga 1053 0.5831 MKSNPESESPHLLFPILSLLFLPCLSMSSPFSTNVLTHQFKEAPQFYNSPNCPSMSDPRICSEEAVHVAMTLDTTYIRGSMAAVLSVLQHSSCPENTFFHFVSSSDASLLRKTLSATFPYLNFQLYHFDDAVVSGLISTSIRSALDCPLNYARTYLPKLLPPCVKRVVYLDSDLVLVDDIAKLATTPLGENHVLAAPEYCNANLTSYFTPSFWSNPSLSLTFADRRACYFNTGVMVIDLERWRAGDYTAKIEEWMELQKRVRIYELGSLPPFLLVFAGNIVPVDHRWNQHGLGGDNFRGLCRDLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWAPYDLLHTPFSFDS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0181 350 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 18 350 - -
Ssu5g0181 350 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 67 330 IPR029044 -
Ssu5g0181 350 SUPERFAMILY Nucleotide-diphospho-sugar transferases 66 341 IPR029044 -
Ssu5g0181 350 Pfam Glycosyl transferase family 8 67 323 IPR002495 GO:0016757
Ssu5g0181 350 PANTHER HEXOSYLTRANSFERASE 18 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0181 Ssu-Chr5 3612607 3613659 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0181 5 3612607 3613659 Ssu5g0181 5 3612607 3613659 ECH