Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0175 ATGGAGAAGGTGAAGGCGAAGCTGAGGAACGTTCCAGAAAGTTCCATTCCGTACTCTGAGTTCTTGCGGATCTGCGTTGAGTCTTGTGAGAATCGCGATCAAGGTGCCGAGTTTGCGAAGATCTTGGATGACTCGGGAAACGTCATCGTTTTGGGGAACGCCGTTTTTCTCCGCCCGGAGCAGGTGGCAAAATCAATAGAGAGCTTAATCTATCAATCAATAGCCAATCCAAACGACCCAAGAAGGAAGGAGCTGGAGCAGATGGAGAAGCAAAAGGCAATGATTGATGACAGGGCCAAGGCCCAGGTCCGATCTGAGCTTTATTCTGGGCTGGGCTTCTTGACGGTTCAGACCCTTGGGTTCATGAGGCTCACTTTCTGGGAGCTAAGTTGGGATGTGATGGAGCCCATATGCTTCTTTGTTACCTCCTTGGGCTTTGCTTTTGCGTATCTTTTTTTCCTTAAGACCTCCACAGAACCCACCTTTCAGGGCTTTTTCTATCACCGATTAAAGGCCAGGCAAGAGCGTCTCATGAAGACACACAACTTCGACCTGCGTAGGTACAACGAGCTATGTAAGGCATGCTATCCAAGTTATCATGCTGGTGCTAAATCTGAACCTTTTCCGCCCTTCAACCACCACTCAGAGGAAACACTTCTAAGAGCCTTGCGTCGTTGA 678 0.4897 MEKVKAKLRNVPESSIPYSEFLRICVESCENRDQGAEFAKILDDSGNVIVLGNAVFLRPEQVAKSIESLIYQSIANPNDPRRKELEQMEKQKAMIDDRAKAQVRSELYSGLGFLTVQTLGFMRLTFWELSWDVMEPICFFVTSLGFAFAYLFFLKTSTEPTFQGFFYHRLKARQERLMKTHNFDLRRYNELCKACYPSYHAGAKSEPFPPFNHHSEETLLRALRR 225
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0175 225 Pfam Mitochondrial calcium uniporter 33 191 IPR006769 -
Ssu5g0175 225 PANTHER CALCIUM UNIPORTER PROTEIN, MITOCHONDRIAL 1 198 IPR039055 GO:0051560
Ssu5g0175 225 PANTHER CALCIUM UNIPORTER PROTEIN 4, MITOCHONDRIAL 1 198 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0175 Ssu-Chr5 3515459 3517930 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0175 5 3515459 3517930 Ssu5g0175 5 3515459 3517930 ECH