Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0174 ATGGAAGAAGGAGGACTCAACTCACAGAAGCTTTCGTTGTTTTACGAATCTGGTACATACTTCTTCCATGATTCCAACGCCGTTTTCGTCGACCCCGTTCGCGTTCTCAATCGTTCCTACCACCGCTTCAGGGTTTCTCCTTCTACCTACTATTCTCGTTTTTTCAAATCCCCAACCCCCAACCCTGTTTCCTCCACCGTTACTTCCTCTCTCACCAAACGCAAACGGAAACGGAAACCGAAAGAGCCTCAACCTCTGAACGAGAGAGAACTAATTGCTCTACAGCGTCACCAGGAAGCGAGGCCTTTGTTGTTGGCGGCACACGAGTGTTTGCTCAAATCAACTGAACTGCTAAATGCTTTGAAAACTTTGAAGAGTGAATCGAGTTGCTCCACCGCGGAGTGTGAGGGCGGTCAACACTCTTTCGTTGACCTGGGAGGGGTAGCGCCTCAACTTGAGGTAACGCTAAGTTTACATGTCCGTGACGCTGACATTGACCCTCGCCAGCCCCCAAACGATTTAGAAGACTTGCCTAGTGTGCAATGCTGTGAACAGAAGGTGCTCCCTGTATTCAATAATTTGGTTGCTAATGACACCAAGGATGATGCCATGGCTGAAATTTTGAACAATCGTTATATAATGCCTCGGGAGAGTTGCTTTTACATGTCTGATCTGGGACAGATTCGCAATCTAATTCCTGCTCATGCTGATTCTGGTTTCAACCTCATAATGGTAGATCCACCTTGGGAAAATGCTAGTGCTCGCCAGAAATCAAGGTACCCGACCTTGCCCAGCAggtattttttatctcttcctATTAAGCAACTCACTCACACGGAAGGAGCACTTGTGGCATTATGGGTGACCAACAGAGAGAAGCTACGGTGTTTtgttgagagagagctttttcCTGCCTGGGGAGTCAGCTATGCTGctaatttttattggttaaagGTGAAAGAAAATGGATCCTGGATTTGTGATTTAGATCTCTTCCATCATAGGCCATACGAATGCCTTATCTTGGGATATAGTCCTGGGAAGGTAAATAATACTAATCaccaatcaaaatttaaaccTGTGAAGAATGATCGCGTGATTATGAGCATTCCTGGGGATTACTCAAGGAAACCCCCAATTGCAGATTTATTACTGGAGCACGTTCCTGGGCTCAAACCTCCCCGGTGTATAGAGCTATTTGCTAGAGAAATTATTGCTGGATGGGTTGCTTGGGGAAATGAACCCCTCTACTTTCAAGATTCTAAATATTTTGTCAGAAAGATGGATCAATGA 1293 0.4346 MEEGGLNSQKLSLFYESGTYFFHDSNAVFVDPVRVLNRSYHRFRVSPSTYYSRFFKSPTPNPVSSTVTSSLTKRKRKRKPKEPQPLNERELIALQRHQEARPLLLAAHECLLKSTELLNALKTLKSESSCSTAECEGGQHSFVDLGGVAPQLEVTLSLHVRDADIDPRQPPNDLEDLPSVQCCEQKVLPVFNNLVANDTKDDAMAEILNNRYIMPRESCFYMSDLGQIRNLIPAHADSGFNLIMVDPPWENASARQKSRYPTLPSRYFLSLPIKQLTHTEGALVALWVTNREKLRCFVERELFPAWGVSYAANFYWLKVKENGSWICDLDLFHHRPYECLILGYSPGKVNNTNHQSKFKPVKNDRVIMSIPGDYSRKPPIADLLLEHVPGLKPPRCIELFAREIIAGWVAWGNEPLYFQDSKYFVRKMDQ 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0174 430 Pfam MT-A70 240 414 IPR007757 -
Ssu5g0174 430 PANTHER METHYLTRANSFERASE-LIKE PROTEIN 4 19 426 - -
Ssu5g0174 430 ProSiteProfiles MT-A70-like family profile. 198 430 IPR007757 -
Ssu5g0174 430 PANTHER N6-ADENOSINE-METHYLTRANSFERASE 19 426 - -
Ssu5g0174 430 MobiDBLite consensus disorder prediction 58 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0174 Ssu-Chr5 3464714 3467955 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0174 5 3464714 3467955 Ssu5g0174 5 3464714 3467955 ECH