Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0168 ATGGCGGGTCGTAGAGACGCGTTGCTGACCAGAGATAAAGGCCAATCAGGCGTTGGATCTCGAATCGTCGTCGCCGTCGTGATTGGCGTTCTCCTCGGCTGCATCTTCGCCTTTTTGTCTCCCAACGGCTTCTTCACCTCCGCTCCCACCCCTCACATTCGCAACCCTAAGATGGTTTCATCTGCATGCGAATCGCCAGAACGAGTTAATGCGCTCAAAGTTGATATTCTATCAGCAAAAGAGAAGAATTCCGAGCTGAAGAAGAAGGTCAAGGTGCTTATGGAGAGGTTGCGTTTGGCCGAGCAAGGAAAGGGTCATGCACAGGAACAGTTTGTTGTGCTTGGGGAGAACCACAAGGCTGGGCCTTTTGGCACCGTAAAGGGTCTCAGAACTAATCCACCTGTCATTCCTGATGAATCTGTGAACCCCAGATTGGCCAAGATTTTGGAGGAAGTTGCTATTTATAAAGAACTTGTTGTTGCTCTTGCTAACTCTAATGTGAAGGAGATGTTGCAGCTATGGTTCACCAACATCAAGAGGGTTGGTATACCTAATTATTTGGTTATAGCCTTAGATGATAACATAGAAGAGTTCTGCAAATCCAATGATGTTCCTGTCTATAGAAGAGATCCTGATCAAGGTGTTGATGCGGTCGGTAAGAGTGGTGGTAACCATGCTGTTTCGGGATTGAAATTTCGTATTTTGAGAGAATTTCTGCAACTGGGTTACAGTGTTCTTCTCTCGGATGTTGATATTGTGTACTTGCAGAATCCCTTCGATTATCTCTATAGGGATTCAGATGTGGAGTCTATGTCCGATGGTCACAATAATATGACAGCTTATGGGTATAATGATGTCTTTGATGAACCCTCGATGGGTTGGGCTCGGTATGCCCATACCATGAGAATATGGGTTTATAACTCTGGTTTCTTTTACATAAGGCCTACTCTTCCTTCAATTGAGCTCTTGGATCGTGTTGCAAACCGGCTTTCTAAAGACACAAAATCATGGGATCAGGCAGTTTTTAATGAGGAGCTCTTTTTCCCTTCTCATCCTGGTTATGATGGACTTCATGCTGCAAAAAGGACAATGGATATGTACCTTTTTATGAACAGTAAGGTTCTCTTCAAGACTGTCAGAAAAGATGCTAAACTTAAGAAGCTGAAGCCAGTGATTGTACATGTTAATTACCATCCTGATAAGTTTGCAAGGATGAAGGCAATAGTTGAATTCTATGCCAACGGAAAACTGGATGCGCTGGGTCATTTCCCAGATGGTTCTGATTGA 1287 0.4406 MAGRRDALLTRDKGQSGVGSRIVVAVVIGVLLGCIFAFLSPNGFFTSAPTPHIRNPKMVSSACESPERVNALKVDILSAKEKNSELKKKVKVLMERLRLAEQGKGHAQEQFVVLGENHKAGPFGTVKGLRTNPPVIPDESVNPRLAKILEEVAIYKELVVALANSNVKEMLQLWFTNIKRVGIPNYLVIALDDNIEEFCKSNDVPVYRRDPDQGVDAVGKSGGNHAVSGLKFRILREFLQLGYSVLLSDVDIVYLQNPFDYLYRDSDVESMSDGHNNMTAYGYNDVFDEPSMGWARYAHTMRIWVYNSGFFYIRPTLPSIELLDRVANRLSKDTKSWDQAVFNEELFFPSHPGYDGLHAAKRTMDMYLFMNSKVLFKTVRKDAKLKKLKPVIVHVNYHPDKFARMKAIVEFYANGKLDALGHFPDGSD 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0168 428 Pfam Nucleotide-diphospho-sugar transferase 183 402 IPR005069 -
Ssu5g0168 428 PANTHER ARABINOSYLTRANSFERASE RRA3 1 428 IPR044290 GO:0016757|GO:0080147
Ssu5g0168 428 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Ssu5g0168 428 Coils Coil 69 103 - -
Ssu5g0168 428 PANTHER GLYCOSYLTRANSFERASE 1 428 - -
Ssu5g0168 428 SUPERFAMILY Nucleotide-diphospho-sugar transferases 159 370 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0168 Ssu-Chr5 3326795 3328910 Wgd