Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0162 atgGCGTCCTCGCAAAAAGGCAAGTTTTTTATCTTCTCTAtgctcttctttttctcttctcttcatggTTTTAGTGCCCCCATAGAACCCCAATCATGTTCAATACAATCCAAGCTCGACCCGGATTCATGCCAGGAACATGTTCCTGAACAACCCCAAAAAACTAATCATTTGAATCAGCAAGTTTTGTTGGATAAACTTGAGGAGTTAGTGAGAAATCTTAGTGATATCGTTGCAAGATTAGAATCAAAGCTACCTGACCCTCCAAGAGAAAAGGGTAGGCTTACTCAAATAAagggtggtggtgatggtgatgatgcTAGATCAAGTAGTAAAGGAGTTGAAGATGGGGAATTTGGGGAAAAAGTCCGAGATGGGGAGAGAGCTAGGGGAATGTCTGTAACTAAGTACACACCCTTTTGGTCAGAGAGGTTCCAGTTTGCAAGTGCTGTGAAGTTGGATTCTGATGCCACTTGTATAAATGTTTTACCTTTTAGGGACCACGAGGGGCTGAGTAAGTATGTGGCTGTTAGTGATAAGAGGGGAAGGGTCTATGTGTTCTTGAGGAATGGAGATGTGTTAGTTGAGTTTGATACTTCATTGGAGTCCCCTATTACGGCAATGGTATCATATACTTCGGTGTATAAGAATGAGAGTTTTGTGGTAACTGGTCATGAAAATGGGGAAATCTTGGTACATAGAGTTTGGGAAGGAGGGTCCAGTGGAGAGGATTATAGTTCTCTTTTCATGGAGAATGTTGGTAAGTTTGTGTCACCTGAAAACCGTGAAGATGGGTTGCCGGTGACTCTCTTGGAAGTTCATTATGTAGGGAGGATGAAGTACATTCTGTCAGCTGATACAAGTGGGAAGATCAAGGTTTTCAAGGAAAATGGTTCGTTGTATGGTTCTGCCACACCGTCTAGTAGGCCGCTTGTTTTCTTGAAGCAACGGCTTATGTTTTTGACAGAAACTGGGGCAGGTTCATTGGATTTAAGGGGCATGAAAATCAGAGAATCGGAATGTGAAGGGCTAAACCACTCTGTTGCTCAAAGTTATGTTTTTGATGCCATGGAGCGTTCCAAAGCATATGGTTTTACCTCGGATGGGGATCTGATTAATGTCTTGTTGCTTGGAGATGTGATGAACTTCAAATGCAGGGTTAGATACAAGAAAAAGTTTGATGTGGATGAGCCTCTTGCTCTGCAGGCAATTAAGGGGTATTTGCTGATTGTTAACCCGGAAAAGGTTTTTGTGTACAACGTTTCATCTCCACATTATGTGAGAGTTGGCGTGCCTCGGCCTGTTTTCTCCTCAAGTCTTGATGAGCTTAGATCATCATTCTTGAATCATCCAACCCCAGGTTTGGATGCGGAAACAAGAGTAATACCCTTGATAGCTAGTGACCGCGAAAAGCTTGTTATTGTTGGGCTTGGAGGTGGGTATGTTGGTATGTATCATTCTAATCTACCTATCTTCAAAGGAGAATTCAATACCATGCTTTGGACTAGTCCTGTATTGTTCTTCATACTTTTCCTATTTGGGGCTTGGCACTTTTTCGCCAAGAAGAAGGAAGCACTTACATCATGGGGACCAGATGATCCTTTTAGCTCCACGTCAGCTACCACTGGTGCGCCATTGGCATCTGGCTCTGTAGACAGATCTTTCGTAGACTCTTCTTCGAGAAGTACCGAAGTTATGGATCTTAGAGGTGGAAATCTCAGAGCTCCACCAAGAAGGTATGGCTCTCCTTCAAGGTATCCTGGTGGGGCTGCAAGTTCCTACAGACTTGGTGCTTCTGCAGATCACAATGCTAGGCCAGCTTCAGTTGATCCCGATTTTCGTGCAGCCTCGGAGCTGAAATTTAGGGCCTCCACGATGGACCCTCCAGGTTTTCCTAAAAGAAGAGATGGTATGTTTGTAGGAAATCAAGTTGTAAATGATCGCAGTTGA 1950 0.4231 MASSQKGKFFIFSMLFFFSSLHGFSAPIEPQSCSIQSKLDPDSCQEHVPEQPQKTNHLNQQVLLDKLEELVRNLSDIVARLESKLPDPPREKGRLTQIKGGGDGDDARSSSKGVEDGEFGEKVRDGERARGMSVTKYTPFWSERFQFASAVKLDSDATCINVLPFRDHEGLSKYVAVSDKRGRVYVFLRNGDVLVEFDTSLESPITAMVSYTSVYKNESFVVTGHENGEILVHRVWEGGSSGEDYSSLFMENVGKFVSPENREDGLPVTLLEVHYVGRMKYILSADTSGKIKVFKENGSLYGSATPSSRPLVFLKQRLMFLTETGAGSLDLRGMKIRESECEGLNHSVAQSYVFDAMERSKAYGFTSDGDLINVLLLGDVMNFKCRVRYKKKFDVDEPLALQAIKGYLLIVNPEKVFVYNVSSPHYVRVGVPRPVFSSSLDELRSSFLNHPTPGLDAETRVIPLIASDREKLVIVGLGGGYVGMYHSNLPIFKGEFNTMLWTSPVLFFILFLFGAWHFFAKKKEALTSWGPDDPFSSTSATTGAPLASGSVDRSFVDSSSRSTEVMDLRGGNLRAPPRRYGSPSRYPGGAASSYRLGASADHNARPASVDPDFRAASELKFRASTMDPPGFPKRRDGMFVGNQVVNDRS 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0162 649 PANTHER OS06G0115200 PROTEIN 1 648 IPR045288 -
Ssu5g0162 649 SUPERFAMILY WD40 repeat-like 171 304 IPR036322 GO:0005515
Ssu5g0162 649 MobiDBLite consensus disorder prediction 624 649 - -
Ssu5g0162 649 Coils Coil 64 84 - -
Ssu5g0162 649 MobiDBLite consensus disorder prediction 84 124 - -
Ssu5g0162 649 MobiDBLite consensus disorder prediction 533 566 - -
Ssu5g0162 649 MobiDBLite consensus disorder prediction 533 587 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0162 5 3176036 3177985 Ssu5g0162 5 3176036 3177985 ECH