Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0159 ATGAGGAAACTGTGTCCTAACTTTGAGAAGGTGGATGGGTTGGAGACGGTGCTGGAGGTCCCTATTCCCGAGGACATGTGGACCAGCATTGGCAACAGTGGCTCCAACCGATGGCAGAACCTTCGCGCTCTCATGAGAGCTCAAATTTCTCCTGACAAGTCACCGTCCCATCTCTCCGCTTCCTCCAACAACGAATTCATCGCATTGCTCAAGCTCGTCGGTTGTCCCCTCATCCCTCTTCAGGTTCAATCCGATCACACCTTAACTCGCCCCCTCAAAGATACTTCCATCGAAGCTTCGAGTGCCAAATATATAGTGCAGCAGTACATAGCTGCCACTGGGGGAGTGGGTGCATTGGATTCGCTGAAAAGCATGTATGCGGTGGGACAAGTGAGAATGTTTGGGTCAGAGATGCGTCAAGGTGGTGATAGCATTAAACCAGTAGGGAGGGCCGAAGTAGGGGGTTTTGTGCTGTGGCAAAAGAACCCAGATTTGTGGTACTTTGAATTGATTGTCTCTGGTTTCAAGGTTAGTGCAGGGAGTGACGGCAAGGTAGCATGGAACCAATCTTCTTCTCAACCTTGTCATGCCAATAAAGGCCCTCCTAGACCCCTTCGCCGCTTCTTTCAGGGGCTGGATCCAAGGTGTACGGCTAACTTGTTCATTGACGCTGTATGTGTAGGAGAGAAAACCATCAACAATGAAGATTGTTTTTTACTCAAGTTAGAGACAGCACATGACATTCTCCAAGCACAAAACACATCCCATACAGAAATTATCAGACACACGGTGTGGGGATACTTTAGCCAGCGCACCGGGCTACTTGTCAAATTTGAGGATACCAAGTTGGTAAGAATGAAACCTACTAAGGGAAATGACTCAGTTTTCTGGGAAACAAGCATGGAGTCTGTGATTGAGGACTATAGGCATGTGGATGGCATTAACATAGCGCATGGTGGCAAGACAGTGGCCATCTTATATAGGTACGGTATGGCCCATAATCACCAGCGGAGGATTGAGGAGACATGGAGGATTGAAGAGGTTGATTTTAACATTTGTGGCTTGTCCGTGGATTGCTTTTTGGCTCCCTCTGATCTCAAGAGGGAACGGCATGGTGTAGAGCAAGTAGTGTAA 1134 0.4815 MRKLCPNFEKVDGLETVLEVPIPEDMWTSIGNSGSNRWQNLRALMRAQISPDKSPSHLSASSNNEFIALLKLVGCPLIPLQVQSDHTLTRPLKDTSIEASSAKYIVQQYIAATGGVGALDSLKSMYAVGQVRMFGSEMRQGGDSIKPVGRAEVGGFVLWQKNPDLWYFELIVSGFKVSAGSDGKVAWNQSSSQPCHANKGPPRPLRRFFQGLDPRCTANLFIDAVCVGEKTINNEDCFLLKLETAHDILQAQNTSHTEIIRHTVWGYFSQRTGLLVKFEDTKLVRMKPTKGNDSVFWETSMESVIEDYRHVDGINIAHGGKTVAILYRYGMAHNHQRRIEETWRIEEVDFNICGLSVDCFLAPSDLKRERHGVEQVV 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0159 377 Pfam Protein of unknown function (DUF620) 125 363 IPR006873 -
Ssu5g0159 377 PANTHER LIPASE 1 369 IPR006873 -
Ssu5g0159 377 PANTHER DUF620 FAMILY PROTEIN (DUF620) 1 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0159 Ssu-Chr5 3154563 3156984 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0159 5 3154563 3156984 Ssu5g0159 5 3154563 3156984 ECH