Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0145 ATGGAAGCTTGCACTTCTTCATACAAGATTATATTGGGCTCGTCCTCCGTCGCACGCCGCAAGATATTATCCGAAATGGGATACGAATTCACAATAATGACTGCAGATATTGATGAAAAGAGCATCCGAAAGGAAATTCCAGAAGAGTTAGTTATGGCTCTCGCCGAAGCCAAGGCCAATGCCATTATATCCAAACTTCAAACTACCAGTAATCTAGAGCGGGTTGATGAACCAACTATTTTGATTGCCGCAGACACAGCAGAAGCCATCTTACAAAGGCTCCCTGTTGATGACTACTTAAAGGATGCTGAGACAACATTATTAATTACCTCTGACCAAGTGGTGGTGTATGAAGGTGTGATTAGGGAAAAGCCAACTAGTAAAGAAGAAGCTCGACAATTCTTGAAAGATTATTCTGGAAGGTGTGCTGCAACTGTGGGATCTGTACTAGTTACTAACCTCAAAACAGGATTGAGAAAAGGAGATTCAGATCGTGTGGAGATATATTTCAATGAAATACCTGATGAAATCATTGAGAAGCTGgTTGATGAGGGAATTACTCTCAATGTTGCTGGGGGCCTGATAATAGAGCATCCTTTAATATTGCCGTTTGTCAAAGAAGTGGTAGGGACAACCGACAGTGTGATGGGACTCCCCAAAGGTTTGACCGAAAAACTGTTGAAGGAGACCCTGGCTTGA 699 0.4235 MEACTSSYKIILGSSSVARRKILSEMGYEFTIMTADIDEKSIRKEIPEELVMALAEAKANAIISKLQTTSNLERVDEPTILIAADTAEAILQRLPVDDYLKDAETTLLITSDQVVVYEGVIREKPTSKEEARQFLKDYSGRCAATVGSVLVTNLKTGLRKGDSDRVEIYFNEIPDEIIEKLVDEGITLNVAGGLIIEHPLILPFVKEVVGTTDSVMGLPKGLTEKLLKETLA 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0145 232 Hamap dTTP/UTP pyrophosphatase. 9 232 IPR003697 GO:0047429
Ssu5g0145 232 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 87 230 IPR003697 GO:0047429
Ssu5g0145 232 PANTHER BIFUNCTIONAL DTTP/UTP PYROPHOSPHATASE/METHYLTRANSFERASE PROTEIN-RELATED 3 86 IPR003697 GO:0047429
Ssu5g0145 232 PANTHER MAF-LIKE PROTEIN 87 230 - -
Ssu5g0145 232 PANTHER MAF-LIKE PROTEIN 3 86 - -
Ssu5g0145 232 SUPERFAMILY ITPase-like 7 229 IPR029001 -
Ssu5g0145 232 PIRSF Maf 87 232 IPR003697 GO:0047429
Ssu5g0145 232 PIRSF Maf 1 94 IPR003697 GO:0047429
Ssu5g0145 232 Gene3D - 2 230 IPR029001 -
Ssu5g0145 232 Pfam Maf-like protein 9 229 IPR003697 GO:0047429
Ssu5g0145 232 CDD Maf 10 227 IPR003697 GO:0047429
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0145 Ssu-Chr5 2902358 2906842 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0145 5 2902358 2906842 Ssu5g0145 5 2902358 2906842 ECH