Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0139 ATGTCCAGTGACGGTGCAACAGCTATGGAGATTCAATTTCCAAGCTACTGTAAAGTCAAGGTACACCGTTCAATATGCTTAGAGCTTCTTAGACTCATTGATAGAATTTTGCATATAATTTTAGCCATCGAGTCAGCCCGACCAAATTGTGCATTAGCGGTGCAGACATTGTGCTCACTACACTCCACTTTGGCCAAAGCCAAGTCAGTTATCGAACATTGTTCCGAGTGCAGTAAACTCTATCTGGCAATCATATCGCATAAGATACTTTCAAGATGTCAAAGAATACGAAATGCTTTTGAGTTGTACTTGAGTCAGATTCAAAATGCGGTTCCAATACCATTGGCTGCTAAGATATCTGCAATGCTACACGACCTTAGGGATACAGAATTTTCCGTGGAATTTGCAGAAGGCGAGGCTAGGAAAGTAGTACTTTCACTGCTTGAGAAGAATTTTCCTGATTCAGCTTCTATGGCAAAGGAAGAATTAGAAGCTATTCAAATTGCAACTTCGAGGTTGGAGATCAAATCCCCGTTCTCTCTCTTAGTAGAGAAAGCAACTCTTAAGAGGCAACTCGAAGACCTCAGTGAAACAAACCTAAAGGAGAAGGAGCTTCTAGAATACCTTTTGTATCTCTTGATCAAATATGGTAAATCCATTTGTCAGTTTCCAAATAGATGCCACTCCTTGAAACATGAATGTCATGACCAATCCTTTGGGCACAAGTTGGTTGTGGATGAAGCAATATGTGAGAATCAAGTCAAGGACTCACTTAAAACAGAAGTTGGAGATCTATGA 798 0.4035 MSSDGATAMEIQFPSYCKVKVHRSICLELLRLIDRILHIILAIESARPNCALAVQTLCSLHSTLAKAKSVIEHCSECSKLYLAIISHKILSRCQRIRNAFELYLSQIQNAVPIPLAAKISAMLHDLRDTEFSVEFAEGEARKVVLSLLEKNFPDSASMAKEELEAIQIATSRLEIKSPFSLLVEKATLKRQLEDLSETNLKEKELLEYLLYLLIKYGKSICQFPNRCHSLKHECHDQSFGHKLVVDEAICENQVKDSLKTEVGDL 265
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0139 265 Coils Coil 185 205 - -
Ssu5g0139 265 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 5 25 238 - -
Ssu5g0139 265 Gene3D - 13 112 IPR036537 GO:0007166
Ssu5g0139 265 PANTHER U BOX DOMAIN-CONTAINING 25 238 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0139 Ssu-Chr5 2836079 2837773 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0139 5 2836079 2837773 Ssu5g0139 5 2836079 2837773 ECH