Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0133 ATGGCTGGAGGCAGTGTTGCAAACACAATTCGAGGGCTGAGTAGTGGGTTTGGGATTTCTAGTGGAATTATTGGGGCGTGTGGGGATGATGAACAAGGGCAGTTATTTGTCCATAACATGAACTCCAATGGAGTTGACCTCTCTAGACtcaggaagaagaaaggacacACAGCACAGTGTGTTTGTTTGGTTGATGCCTTGGGAAACCGTACCATGCGACCCTGTCTCTCAAATGCTGTAAAAGTTCAGGCAGAAGAATTGACCAAAGAGGATTTTAAGGGCTCCAAGTGGTTGGTCTTAAGATATGCAATACTTAATTTGGAAGTTATTCAAGCAGCCATTCTTTTAGCAAAACAGGAAGGTCTTCTTGTTTCCTTGGATTTGGCCAGCTTTGAGATGGTTAGGAATTTCAAACAACCACTTTTGAAGTTACTTGAGTCTGGGAACATAGACCTTTGCTTTGCCAATGAGGATGAGGCAACAGAACTTCTAAGGGGCGAACAAAATGCTGATCCAGTGACTGCGGTAGAATTTCTTGCCAAATCCTGCCAATGGGCCGTGGTAACACTGGGTCCTAATGGATGCATTGCTAAACATGGAAACGAGGtgtgtaaattatatttcacacctgatttccatttttttttatatggtgTACAGTTAGTCTGA 669 0.3976 MAGGSVANTIRGLSSGFGISSGIIGACGDDEQGQLFVHNMNSNGVDLSRLRKKKGHTAQCVCLVDALGNRTMRPCLSNAVKVQAEELTKEDFKGSKWLVLRYAILNLEVIQAAILLAKQEGLLVSLDLASFEMVRNFKQPLLKLLESGNIDLCFANEDEATELLRGEQNADPVTAVEFLAKSCQWAVVTLGPNGCIAKHGNEVCKLYFTPDFHFFLYGVQLV 222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0133 222 Pfam pfkB family carbohydrate kinase 2 205 IPR011611 -
Ssu5g0133 222 PANTHER SUGAR KINASE 1 206 - -
Ssu5g0133 222 PANTHER CARBOHYDRATE KINASE-LIKE 1 206 - -
Ssu5g0133 222 Gene3D - 1 213 IPR029056 -
Ssu5g0133 222 CDD adenosine_kinase 1 203 - -
Ssu5g0133 222 SUPERFAMILY Ribokinase-like 2 205 IPR029056 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0133 Ssu-Chr5 2780523 2782164 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0133 5 2780523 2782164 Ssu5g0133 5 2780523 2782164 ECH