Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0127 ATGGGTTCAGCGTCCGAAGCCGTTTGCGTTACAGGGGCTGCTGGTTTCATCGGATCATGGCTTGTCATGAGACTCCTCGAGCGTGGCTATACGGTTCGAGCCACCGTACGCGACCCAGCCAACATGAAGAAGGTGAAGCATTTGCTGGAACTGCCAGGTGCAAAGACCAAGCTGTCTCTGTGGAAGGCTGATCTAGCTGAAGAGGGAAGCTTCGATGAAGCCATTAAAGGGTGCACCGGAGTTTTCCACGTGGCCACCCCGATGGACTTTGATTCCAAGGATCCTGAGAATGAAGTGATAAAGCCTACAATAAACGGAGTAATAGACATCATGAAAGCGTGCCTGAAGGCAAAAACTGTCCGAAGGCTTATATTCACGTCGTCAGCCGGAACCCTCAACGTTATTGAGCACCAAAAGCCAATGTTCGACGAGACCTGCTGGAGTGACGTTGAGTTTTGCCGGAGAGTAAAAATGACTGGTTGGATGTATTTCGTTTCTAAAACACTGGCAGAGAAAGAAGCATGGAAATTTGCCAAAGAGAACGGCCTGGACTTCATCACTGTCATTCCACCTCTTGTCGTTGGCCCATTTCTGATGCCAACAATGCCACCTAGCCTAATCACCGCTCTTTCACCTGTCACTGGAAATGAGGCCCATTATTCGATCATAAAGCAAGCCCAATTCGTACACTTAGATGATCTCTGTCTGGCacacatatttttgtttgaacagCCAAAAGTCGAAGGGAGGTACATATGCAGTGCATGTGACGCTACTATTCATGATATTGCCAAATTACTTAACGAAAAATACCCAGAGTACAAGGTCCCCACGAAGTTCAAGAATATTCCAGATCAATTGGAGCTTGTCAGATTTTCTTCCAAGAAGATCACAGACTTGGGATTCCAATTTAAGTACGGCTTAGAGGACATGTACACTGGAGCAATTGACACATGCAGAGAAAAAGGGCTTCTTCCTAAACCTGCAGAAACTCCAGTGAGTGGCgtcatttag 1014 0.4586 MGSASEAVCVTGAAGFIGSWLVMRLLERGYTVRATVRDPANMKKVKHLLELPGAKTKLSLWKADLAEEGSFDEAIKGCTGVFHVATPMDFDSKDPENEVIKPTINGVIDIMKACLKAKTVRRLIFTSSAGTLNVIEHQKPMFDETCWSDVEFCRRVKMTGWMYFVSKTLAEKEAWKFAKENGLDFITVIPPLVVGPFLMPTMPPSLITALSPVTGNEAHYSIIKQAQFVHLDDLCLAHIFLFEQPKVEGRYICSACDATIHDIAKLLNEKYPEYKVPTKFKNIPDQLELVRFSSKKITDLGFQFKYGLEDMYTGAIDTCREKGLLPKPAETPVSGVI 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0127 337 Gene3D - 1 337 - -
Ssu5g0127 337 Pfam NAD dependent epimerase/dehydratase family 8 246 IPR001509 -
Ssu5g0127 337 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 2 329 - -
Ssu5g0127 337 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 320 IPR036291 -
Ssu5g0127 337 CDD FR_SDR_e 8 302 - -
Ssu5g0127 337 PANTHER DIHYDROFLAVONAL-4-REDUCTASE 2 2 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0127 Ssu-Chr5 2647421 2654188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0127 5 2647421 2654188 Ssu5g0127 5 2647421 2654188 ECH