Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0122 ATGGAAACGGTTGAAGTACTTCACATGAACAAAGGCGTAGGCGAAACTAGCTATGCCATGAACTCTGCCGTTCAGAATACGATTATCTCTGCCGCAAAGCCAGCAACACAGAAAGCTATTGTGCAAATTCTATGTTCAAGTTGGCCAGAGAAGATGGGCATTGCGGACTTGGGTTGCTCCTCGGGACCCAATGCCTTGAGGGTCATTTCGGAGATAGTGGATGCTGTGTATGCCACCACGCGCCTCTTAGATCGCCCAGCGCCGGAGTTGGTGGTGTATTTGAACGACCTTTTCACCAATGACTTCAACAACATCTTTGGCTCATTGCCATCTTTCTACAAAAAACAGAAGCAAGAAAAGGGAAGTGGCTTTGGATCCTGTTTCGTTTCCGCTGTCCCTGGCACTTTCTATGGCAGGCTTTTCCCTAGCAAGAGCCTCCACTTTGTGCACTCTTCTTCCAGCCTCCATTGGCTTTCTCagGTTCCCGCTGGCTTAGAGGATAGAGCGTTGAACAAGGGAAAGATCTACATCTCAAAGAGCAGTCCTCAGTGCGTGCTAGATGCTTATTCTCAGCAATTCCAAAATGATTTTTCACTGTTTCTGGCTTCGCGCTCCCAAGAGATGGTGGCCGGTGGACGCATGGTGTTGTCTATTATGGGCAGGGACTCCGTGGACCCAACAACTGACCACAGTTGCTACCAGTGGGAACTGTTGGCGCGCTCCCTTATGAGCATGGTTTCTGAGGGTCTTTTAGAAGAGGAAATGGTGGATTCTTTTGACGCTCCTTACTATGCACCATGTTTGGAGGAACTGAAATTGGAGATTGAAAAGGAAGGGTCATTTACGGTGGATGGGCATGAAGCTTATGAAATCGATTGGGATGGTGGAATGGAATTGCAAAGTGATTCCCCTCATGGTACACCATTATCAAGTGGAGAACGAGTGGCAAGGACCGTAAGGGCTGTGGTTGAGTCCATGTTGGAATCTCATTTTGGGTGTCACGTAATGGATGAGCTGTTTCGAAGGTACGCAGAAATTGTAGAGGACCATTTATCCAAGACTAGGACCAAATACATCAATTTGGTCATTTCTCTCGTCGAGCGATGTTGA 1110 0.4766 METVEVLHMNKGVGETSYAMNSAVQNTIISAAKPATQKAIVQILCSSWPEKMGIADLGCSSGPNALRVISEIVDAVYATTRLLDRPAPELVVYLNDLFTNDFNNIFGSLPSFYKKQKQEKGSGFGSCFVSAVPGTFYGRLFPSKSLHFVHSSSSLHWLSQVPAGLEDRALNKGKIYISKSSPQCVLDAYSQQFQNDFSLFLASRSQEMVAGGRMVLSIMGRDSVDPTTDHSCYQWELLARSLMSMVSEGLLEEEMVDSFDAPYYAPCLEELKLEIEKEGSFTVDGHEAYEIDWDGGMELQSDSPHGTPLSSGERVARTVRAVVESMLESHFGCHVMDELFRRYAEIVEDHLSKTRTKYINLVISLVERC 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0122 369 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 5 366 IPR005299 GO:0008168
Ssu5g0122 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 366 IPR029063 -
Ssu5g0122 369 Gene3D - 6 354 IPR042086 -
Ssu5g0122 369 PANTHER JASMONATE O-METHYLTRANSFERASE-LIKE 5 366 - -
Ssu5g0122 369 Pfam SAM dependent carboxyl methyltransferase 39 365 IPR005299 GO:0008168
Ssu5g0122 369 Gene3D Vaccinia Virus protein VP39 21 355 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0122 Ssu-Chr5 2527350 2533248 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0122 5 2527350 2533248 Ssu5g0122 5 2527350 2533248 ECH