Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0109 ATGGAAGACTATGTTATAAAGACAGTTGTTGTTGGAGTTGTTTCATGGACATCAGCTTTTGTGGTAGTGAGAAGAATATTTCCCAAGCGCTCTTTTGATTTCTGCAACCGCGTTGTGTCCACGCTCCATGCAACTTTAGCAGTAACATTGGCTTGGCTCTCTGTTGAAGATTGGAGGTGTCCAATCTGTCCTGTGGGTTCAAAATCTTCACCCCAACAGATGCAAGTCCTAGCAGTGAGCCTTTCTTATCTCATTTATGATCTAGCTTGTTGTCACTTGGGTGAAAGAGTCAGTCTAGACAACACCGTCCACCATTTGGTAAGCATTGTTGGAATTGGAGCAGGTCTTTCCTatcaaaagTGTGGCTCAGAAATGGTAGCGACAATATGGATAACAGAGATATCAAGCCCATTCTTGCATTTGAGGGAGCTTCTAAAAGAGCTTGGTTACAGAGATACCCTCCTTAATTTGGCTGCTGATATTCTATTTGCTGCCATATTTACATTTGCTAGGTTGGTGGTCGGACCATGTATCACTTACGTAACTTTATCTGCCAACTATCCACTTCTCATAAAGGCTATGGGATTGGGTTTGCAGCTGGTAAGTGCAGTCTGGTTCTTCAAAATTGTAAGAATGATAAAACACAAATTAACCAAGAGAACTTCGAAAAATGAGGTCAACCACGCCAACATCAGGAGGAAGACTACTAACTCAAAATTGCAATATAGTTAG 732 0.4126 MEDYVIKTVVVGVVSWTSAFVVVRRIFPKRSFDFCNRVVSTLHATLAVTLAWLSVEDWRCPICPVGSKSSPQQMQVLAVSLSYLIYDLACCHLGERVSLDNTVHHLVSIVGIGAGLSYQKCGSEMVATIWITEISSPFLHLRELLKELGYRDTLLNLAADILFAAIFTFARLVVGPCITYVTLSANYPLLIKAMGLGLQLVSAVWFFKIVRMIKHKLTKRTSKNEVNHANIRRKTTNSKLQYS 243
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0109 243 PANTHER - 2 226 - -
Ssu5g0109 243 ProSiteProfiles TLC domain profile. 29 218 IPR006634 GO:0016021
Ssu5g0109 243 PANTHER TRANSMEMBRANE PROTEIN 136 2 226 IPR042512 -
Ssu5g0109 243 Pfam TLC domain 33 211 IPR006634 GO:0016021
Ssu5g0109 243 SMART lag1_27 29 218 IPR006634 GO:0016021
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0109 Ssu-Chr5 2346611 2349098 Proximal
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0109 5 2346611 2349098 Ssu5g0109 5 2346611 2349098 ECH