Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0100 atgGCATTCCCAATGCCACAGCTCGTGCCATGTGCTTCTCTATCTCTCAACCACCACTCCTTAAGTTTTTGTTGTAATAATACTCTAACGCTACCATCATGGCGTCGCCGGAGCCTGGACTCTCTCCGGTGTTCGGCGTTGGAGAAGCCCCACGACGAGGCGTTGGAGCTGCCCCTTTTCCCTCTCCCTCTGGTCCTCTTCCCGGGCGCGATCCTCCCCCTCCAGATCTTCGAGTTCCGGTACCGCATCATGATGCACACGCTCCTCCACACCGACCTCCGCTTCGGCGTCGTGTACAACGACGCCGTTTCTGGGGCCGCGGAGGTCGGCTGCGTGGGGGAGGTCGTCAAGCACGAGCGCCTCGTGGACGACCGCTTCTTCCTGGTCTGCAAGGGGCAGGAGCGGTTCCGCGTGAGCGGCGTCGTGCGCACGAAACCCTACCTCGTGGGGCGCGTGACGTGGCTCGAGGACAGGCCCTCCCGGAACGTCGGAGGCGACGCGGATGACGTGGAGGGGCTGGCGCGCGAGGTGGAGGGGTACATGAAGGACGTGATAAGGTTGTCGAACCGGCTGGGTGGGAAGGGGGAGAACGAAATCGGAGATTTGCGACGGAACTTGTTTCCGACGCCGTTTTCGTTCTTTGTGGGGAGCACGTTCGAGGGCGCGCCGAGGGAACAACAGGCGCTGCTGGAGTTGGAGGACACGGCGACGAGGTTGAAGAGGGAGAAGGACACGTTGAAGAACACGCTTAATTACCTCACTGCTGCCTCTGCTGTCAAAGATGCCTTTCCTTCTTCTTGA 801 0.6067 MAFPMPQLVPCASLSLNHHSLSFCCNNTLTLPSWRRRSLDSLRCSALEKPHDEALELPLFPLPLVLFPGAILPLQIFEFRYRIMMHTLLHTDLRFGVVYNDAVSGAAEVGCVGEVVKHERLVDDRFFLVCKGQERFRVSGVVRTKPYLVGRVTWLEDRPSRNVGGDADDVEGLAREVEGYMKDVIRLSNRLGGKGENEIGDLRRNLFPTPFSFFVGSTFEGAPREQQALLELEDTATRLKREKDTLKNTLNYLTAASAVKDAFPSS 266
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0100 266 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 49 266 - -
Ssu5g0100 266 SUPERFAMILY PUA domain-like 56 247 IPR015947 -
Ssu5g0100 266 SMART lon_5 56 248 IPR003111 -
Ssu5g0100 266 Coils Coil 222 256 - -
Ssu5g0100 266 ProSiteProfiles Lon N-terminal domain profile. 57 248 IPR003111 -
Ssu5g0100 266 Gene3D - 55 157 IPR046336 -
Ssu5g0100 266 Pfam ATP-dependent protease La (LON) substrate-binding domain 56 247 IPR003111 -
Ssu5g0100 266 PANTHER ATP-DEPENDENT PROTEASE LA (LON) DOMAIN PROTEIN 49 266 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu5g0100 Ssu-Chr5 2216844 2217644 Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0100 5 2216844 2217644 Ssu1g3923 1 97277001 97277879 PCT