Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0082 atGTGCAAGTTGTGTGCCTGCATAATGGCTGTCCTTGTTCTTCTTTCTCTACTATCCGTCTTTATTCTCTTGATTATCCACACACACAAACGAAACAGTGCAAGACCACCTCTTCCACCTGGTCCTCCACCTCTTCCTCTCATTGGCAACCTACACCTTCTCGATAACTCATCCCCACATCGCTGCCTATGGCAACTCGCCAAACTCTACGGTCCTCTCATGTCGTTGCGCCTCGGCACCGTACCAACCGTGGTCGTTTCCTCAGCCAAAATCGCCAAGGAAGTGTTGAAAACCCACGACCTCAAGTTCGCAAGCAGGCCTCCCTTCGTGGGCCAAAGAAAACTCTCTTACAACGGCCTTGACTTGGGCTTTGCACCGTACGGCCCTTGCTGGAGAGAAATGAAGAAACTCTGCACCATCCACCTCTTCAGCTCGCAACGCGTTCAGTCCTTTCGCCCCGTTCGCGAGGACGAGGTTGCCCGAATGGTTCGGAAACTGAAGCAACACGAAGCTTCGGGCACGGTCGTGAACTTGACCGAAACGTTGATGTCTTTCACGAACTCTTTGATTTGTAGAATCGCGTTCGGGAAACAGTACGGTTGTGGGTACGAGGAAGTTGAGGCGGGAAACCGGAGCAGTAGGTTGCAGGTTCTGCTCAACGAGGCTCAAGCGTTGCTCACGGAGTTTTACTTTTCGGATTATTTTCCGCTGCTGGGGTGGGTTGATAGACTCAGGGGAATTCTGTCTCGGCTTGATAAAACGTTCAAGGAGTTGGATGTGATCTACGAACGAGTCATCTATGACCACATGGATTCAGCCAAGGGGGACAAACAAACTAATGACAAAGAAGTGGCCGATATCATTGATATCTTTCTCCAGCTACTTGATGATCGATCGTTCTCGTTTGATCTCACTCTCGATCACATAAAGGCCGTGCTTATGAATATCTTTATCGCAGGAACAGACCCGAGTTCCGCGACAATAGTTTGGGCCATGACTGCACTGTTGAAGAATCCTAATGCGATGAGCAAGGTTCAACGGGAAGTGAGAAATTTATTTGGGGACAAAGATTTTATAAACGAAGATGATGTTGAAAGGCTTCCTTATCTTAAAGCAGTGGTGAAAGAGACATTGAGACTATTCCCACCTTCACCACTACTTTTGCCAAGGGAAACGATGGAGCATTGCAACATAGATGGGTACGAAATTCAACCCAAAACCATAGTGCATGTTAATGTGTGGGCTATAGCAAGGGACCCTCAATATTGGGAAGAGCCCGAGGAATTTTGTCCTGAAAGGTTCCTTGGGAGTTCGATGGAGGTAAAGGGAAATGAGTTTGAGGTAATCCCTTTTGGATCTGGACGGAGAATGTGTCCCGCGAAGCACATGGGTATTGTCAATGTTGAGCTTTCACTTGCCAATCTCGTCCACACGTTTGATTGGGGAGTGCCTAAAGGGGTTGATGAGGAAGAGATGTTGGACACGCAAGTGAAACCAGGAATAACGATGCACAAGAAAAGTGATCTTTACCTAGTGGCAAAGAAACGGACAACATAG 1557 0.4791 MCKLCACIMAVLVLLSLLSVFILLIIHTHKRNSARPPLPPGPPPLPLIGNLHLLDNSSPHRCLWQLAKLYGPLMSLRLGTVPTVVVSSAKIAKEVLKTHDLKFASRPPFVGQRKLSYNGLDLGFAPYGPCWREMKKLCTIHLFSSQRVQSFRPVREDEVARMVRKLKQHEASGTVVNLTETLMSFTNSLICRIAFGKQYGCGYEEVEAGNRSSRLQVLLNEAQALLTEFYFSDYFPLLGWVDRLRGILSRLDKTFKELDVIYERVIYDHMDSAKGDKQTNDKEVADIIDIFLQLLDDRSFSFDLTLDHIKAVLMNIFIAGTDPSSATIVWAMTALLKNPNAMSKVQREVRNLFGDKDFINEDDVERLPYLKAVVKETLRLFPPSPLLLPRETMEHCNIDGYEIQPKTIVHVNVWAIARDPQYWEEPEEFCPERFLGSSMEVKGNEFEVIPFGSGRRMCPAKHMGIVNVELSLANLVHTFDWGVPKGVDEEEMLDTQVKPGITMHKKSDLYLVAKKRTT 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0082 518 PRINTS P450 superfamily signature 372 383 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS P450 superfamily signature 319 336 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS P450 superfamily signature 449 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 SUPERFAMILY Cytochrome P450 39 516 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 Pfam Cytochrome P450 39 509 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PANTHER CYTOCHROME P450 83B1 16 515 - -
Ssu5g0082 518 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 448 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 185 203 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 371 389 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 308 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 328 354 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 PRINTS E-class P450 group I signature 458 481 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 Gene3D Cytochrome P450 31 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ssu5g0082 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 451 460 IPR017972 GO:0005506|GO:0016705
Ssu5g0082 518 PANTHER CYTOCHROME P450 71B11-RELATED 16 515 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0082 Ssu-Chr5 1832896 1836194 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0082 5 1832896 1836194 Ssu5g0082 5 1832896 1836194 ECH