Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0071 ATGACACTATCTCCTTCTCTTTCCCTCCCTAACTTGCATTCTTCCTTTCTTTGCTGCCCTCTAAAATCCAAGCCATCAGCTAGAAATATAATTCAACCAAAACCCACTTCTTATCCACGCATTAGAGCTTTGGAGCTTGATCAAAACACGgTAGTGGCTATAAGTGTAGGTCTTGTGAGTGTGGCTGTCGGGATTGGCATTCCAGTGTTCTATGAAACCCAAATCGATAATGCTGCTAAGCGAGAAAACACTCAGCCCTGCTTCCCATGCAATGGATCTGGCGCTCAGAAATGCAGATTTTGCTTGGGATCTGGCAATGTGACAGTTGAACTTGGTGGAGGTGAGAAGGAGGTCTCTCGATGCATAAATTGTGATGGTGTTGGTTCACTGACATGCACAACTTGTCAAGGATCCGGAATTCAACCTCGTTACCTTGACCGCAGAGAATTCAAAGATGATGACTGA 465 0.4473 MTLSPSLSLPNLHSSFLCCPLKSKPSARNIIQPKPTSYPRIRALELDQNTVVAISVGLVSVAVGIGIPVFYETQIDNAAKRENTQPCFPCNGSGAQKCRFCLGSGNVTVELGGGEKEVSRCINCDGVGSLTCTTCQGSGIQPRYLDRREFKDDD 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0071 154 Pfam Family of unknown function (DUF5351) 98 129 IPR035272 -
Ssu5g0071 154 PANTHER PLASTID TRANSCRIPTIONALLY ACTIVE PROTEIN 8 153 - -
Ssu5g0071 154 PANTHER PROTEIN DISULFIDE-ISOMERASE LQY1, CHLOROPLASTIC 8 153 - -
Ssu5g0071 154 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 82 141 IPR036410 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0071 5 1380762 1383111 Ssu5g0071 5 1380762 1383111 ECH