Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0070 ATGCTTATCCAGCTTATGAATGCTATAAAGCAGTTGAAAAGAATAAGCCAGAGATTGAACAACTTCGCTTTTGGTGCCAGTATTGGTATACATTTGGCTTGTTTGGTTCGGCTGTTTGCAagagaaataatcatttttgttttcaaaagctttttcaacagGATTTTGGTGGCTGTTTTGACAGTATGTGAGAGGATTGGTGATACTTTTATATCATGGGTCCCAATGTACAGTGAAGCTAAGTTGGCATTTTTCATATTTCTGTGGTACCCTAAAACTaagGGAACAACATATGTCTATGACTCCTTCTTTAGACCATATGTTGCAAAACATGAGACAGAAATTGATCGCAACTTGTTGGAACTAAGGACAAGGGCAGGGGATATTGCAGTTGTGTATTGGCAAAGAGCTTTCAGTTATGGTCAGACTAGAATATATGACATTTTGCAGTTTGTTGCTGCACAATCAACTCCATCACCTCGCCCTGCTCAGCAACGACCAGGTGTGAGGGTCCGTCAACCTGCACCTGCAAAACCAGCTGCTGCAACAGAACCACAAGTTGAGGAACCGCCATCTCCTACCTCTAGCACATCTTCGAGTCAGCTCCAGAATGAGGTAGCAGAGGAATTGGGTTCTCACAAGTGCCTAAATCAGCCTCACCTGTAG 666 0.4084 MLIQLMNAIKQLKRISQRLNNFAFGASIGIHLACLVRLFAREIIIFVFKSFFNRILVAVLTVCERIGDTFISWVPMYSEAKLAFFIFLWYPKTKGTTYVYDSFFRPYVAKHETEIDRNLLELRTRAGDIAVVYWQRAFSYGQTRIYDILQFVAAQSTPSPRPAQQRPGVRVRQPAPAKPAAATEPQVEEPPSPTSSTSSSQLQNEVAEELGSHKCLNQPHL 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0070 221 PANTHER HVA22-LIKE PROTEIN 54 199 - -
Ssu5g0070 221 MobiDBLite consensus disorder prediction 188 207 - -
Ssu5g0070 221 MobiDBLite consensus disorder prediction 157 221 - -
Ssu5g0070 221 PANTHER HVA22-LIKE PROTEINS 54 199 IPR004345 -
Ssu5g0070 221 Pfam TB2/DP1, HVA22 family 55 107 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0070 Ssu-Chr5 1351636 1353216 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0070 5 1351636 1353216 Ssu5g0070 5 1351636 1353216 ECH
Ssu5g0070 5 1351636 1353216 Ssu1g3971 1 98266340 98268296 PCT