Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0069 ATGCGTGAAAGTAGCAGCAGAGTCACTTGGGAAGGTTGCAGCGTCCTTCTCGACATCAACGACGGAGACCGCCTCGTTTTCGCTCGTCTCTCACCCGCTGCGAAATTGAAGATTGGGAATAAGAACTGCTCTCTGCAACCGTTGATCGGTCGTGCCTTCGGCACTGTTTTTCAAGTCGAAACCGCACCCGATGGACCTTATCTCTCTCCCGCCCAAGTTAATGTTAATAATTCTGAAGAAGTAAGAGATGGTCAAGTGGATGTTGAGTCGAGGGACAAAGTTAATGTTAGTAATGCTGAAGAAGTAAGAGATGGTCAAGAAAATGTTGAGACGAGGGACAATCGCGCACTGGTTGACAATAATACGGCGCAAAGCCTGACTGGTGAAGATATAGAAGCTATGCGAAGGCAGGGTGCAAGAGGTAATGAAATAATTGAAGCTCTCATTGCCAACAGTGCGACgtttgaaaagaaaacatcaTTCTCACAGGAGAAATATAGACTTAAGAAGCAGAAGAAATATGCACCAAAAGTACTTATGAGGCGTCCTGGTGCTCGAAGTATATGTGAGGCATATTTTAAGAAGTATCCATCTAAAATTGGATTCTTGCGGGTGGACACATTGTCCCTTCTACTTTCCATGGCTAATGTTTCTTCAAATTCTGACGTTCTCATTGTTGATATGGTTGGTGGCCTTCTTACTGGTGCTGTGGCAGAACGTTTAGGAggTACCGGTTTTGTATGCAACTCATATTTTGGACAGGCACCATATTCCATGGATATTGTGAGGATATTTAACTTAAGTGATGAAATCTGCAAGAGAATTGTACGGTCTCCCATTTCTGATTTGTTATCACAAAAAGAATCACCTGAACAAATTGTGCAACATGATGATGTCTGCAATGTGGAAAGCCAGTCAAATGATCAAATATGTGCCTCAGCCAGCATGGAGGAAATCTCTAATTCATTAGAAAATGGAATTTCTGATCTTGGGGCTGAGAATACAGAACCTGCTATAGAAGTTCGCAAAGCTCCAAAGGCTGGAGAGAAGGCACAGAAAGAAATCATTGACTTGTGGAAGGAAAATGGTTTTTCTAGTCTAATTATTGCTGCACCAGAGTTGGATACTTGGACATTGGTTAGAGATCTCTTGCCCCTTTTAGCAAACTCTGCTCCATTTGCTATTTATCACCAATATCTTCAGCCTCTTGCAACTTGCATGCACAATTTACAGCTTGGGAAAATGGCTATTGGATTACAAATAACAGAGCCTTGGCTACGTGAATACCAGGTACTTCCATCTAGAACTCACCCGTGCATGCAAATGAGTGCGTTTGGGGGCTATATTCTCAGTGGGACTAAGATATGCAGCAGCAGCTAA 1380 0.4232 MRESSSRVTWEGCSVLLDINDGDRLVFARLSPAAKLKIGNKNCSLQPLIGRAFGTVFQVETAPDGPYLSPAQVNVNNSEEVRDGQVDVESRDKVNVSNAEEVRDGQENVETRDNRALVDNNTAQSLTGEDIEAMRRQGARGNEIIEALIANSATFEKKTSFSQEKYRLKKQKKYAPKVLMRRPGARSICEAYFKKYPSKIGFLRVDTLSLLLSMANVSSNSDVLIVDMVGGLLTGAVAERLGGTGFVCNSYFGQAPYSMDIVRIFNLSDEICKRIVRSPISDLLSQKESPEQIVQHDDVCNVESQSNDQICASASMEEISNSLENGISDLGAENTEPAIEVRKAPKAGEKAQKEIIDLWKENGFSSLIIAAPELDTWTLVRDLLPLLANSAPFAIYHQYLQPLATCMHNLQLGKMAIGLQITEPWLREYQVLPSRTHPCMQMSAFGGYILSGTKICSSS 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0069 459 Pfam Gcd10p family 14 289 IPR017423 GO:0030488|GO:0031515
Ssu5g0069 459 PANTHER TRANSLATION INITIATION FACTOR EIF3-RELATED 5 458 IPR017423 GO:0030488|GO:0031515
Ssu5g0069 459 PIRSF TRM6 1 459 IPR017423 GO:0030488|GO:0031515
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0069 5 1338464 1345394 Ssu5g0069 5 1338464 1345394 ECH