Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0065 ATGGGATTAAATATGAACAGACAATCACGGATTTCTTATGTTGAGAGGAAACCAGATGTGGAATTTGAGGCGGTCAGAGGTGTTGATTGTAAGCAACAACAGCATATGATCAAGGAACAAAAGGGAAAGGAAGGCCTTGCATTATGGCCAGGCTTGTCTCCAGTGGCACCAGCTGGCCAGGCTTATCAGCAGTCTTCTGCTACTAAAGCTCCTGATTGGCTGGAAGCTGCAATCTGTTCCTCCAAACTGGATTTGAGGGAAAGTTCAACTTGTTCTTCTAGTGGGAAGATTTTTAGTCCTAAAAGATCGTGGAAGAGGTGTGCAGCTCATGTTCACATCAGTCATATAATCAATCGTTTAGAGGTGCCAAAAAGACAGGTCATCAAAGAAACTGAGCTTTATGAATGTCATCAAATGAGAGCACATGAAGTATCAAAGCGTGGAGTTCTTTTGGAAGTACACAGCTTAAACGGAATAAAAAATGGAGTTACTTCTTCTACTGTGAGGAATCCCCACGAAAGTAAGAATATTATTCTTCAGCAGCAATGCCATTATCGAGACATATCACAGGCTGTTCCAACACCTGTGGTGTATGGCCATCAAAAGCAAaatttcaatttcttgtcCTTGTCAGCAGGAAGTAATGGGTTAAAGGTcgacaataattataataaaattggaAGTAGGTTGGAACCATTGTCAAAATTGCAAGTGCCTTATTTACAGTCACTAGCAGCACAGCAGCATGGGGTCATGCCAATTCCTGCGGCTCAGAGTCAGTATGCCTCCACTTCTTACCTTGATCAGCTTTCCGTCGCAGGACCACAGGTTCGGTTGCAGCAACCTCATTATTTTGGTAACCCGTTATGTGGCACTCATTATAGTTCAACGGTCTCACATAAACAAGAGCTCCAAAGCTTTTGGGGGGTGCAACAAGCAGAACAAGGTGGTAGGTCTACAGTTAATTTCAACATTATGAGGACCCAATATCCTAATTGGCAAAATGGAAGGCATGACTCTTCTGCATTGAGTCCATGTGCCCAAGCCATCCTTCCCTATTCCCCTGCATCACAAGAAATATTTGGATCCAAGATTACTTCAATCTCTGGGCAACAGAAGCAGCTCCTTGCCCTCTTCCAGGACAAATGGAAATGGACTAGACCTTCCTCTCCCTTCTGTATgtga 1185 0.4228 MGLNMNRQSRISYVERKPDVEFEAVRGVDCKQQQHMIKEQKGKEGLALWPGLSPVAPAGQAYQQSSATKAPDWLEAAICSSKLDLRESSTCSSSGKIFSPKRSWKRCAAHVHISHIINRLEVPKRQVIKETELYECHQMRAHEVSKRGVLLEVHSLNGIKNGVTSSTVRNPHESKNIILQQQCHYRDISQAVPTPVVYGHQKQNFNFLSLSAGSNGLKVDNNYNKIGSRLEPLSKLQVPYLQSLAAQQHGVMPIPAAQSQYASTSYLDQLSVAGPQVRLQQPHYFGNPLCGTHYSSTVSHKQELQSFWGVQQAEQGGRSTVNFNIMRTQYPNWQNGRHDSSALSPCAQAILPYSPASQEIFGSKITSISGQQKQLLALFQDKWKWTRPSSPFCM 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0065 394 PANTHER - 1 375 - -
Ssu5g0065 394 PANTHER OS02G0121500 PROTEIN 1 375 IPR040305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0065 Ssu-Chr5 1267684 1269789 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g0065 5 1267684 1269789 Ssu5g0065 5 1267684 1269789 ECH
Ssu5g0065 5 1267684 1269789 Ssu1g3975 1 98320578 98323081 PCT