Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g0002 ATGTATGCCACTGGACCATATGCTCACGAAACACAGCTGGTGTCTCCTCCAGTCTTCTCAAATTTCACTACTGAGCCATCTACTGCTCCTCTCACTCCTCCACCTGAGTTGGCTCATTTAACAACTCCCTCTTCCCCAGATGTACCTTttgctcattttctttcatcttcaGTGGATCTCAAAAACAGTGACAAGGGCAACTACATCACTGCAAATGACCTTCAAGCTACATATTCACTCTACCCTGGAAGTCCTGCCAGTAGCCTTATATCTCCAATATCAAGGAACTCTGGTGACTGTTTATCATCTTCTTTTCCTGAACGGGAGTTCCGTCCACAGTGGGATTCATCACTATCTCCTGAGAATGGAAAATATCAGAGAACTGGGTCCGGGAGGGTGTCTGGGCATGACACAAATGGTGTCACTATGGCATCCCAAGATACAAATTTCTTTTGCCCTGCTACCTATGCACAATTCTATTTAGACCAAAATCCTCCATTTCCTCATAATGGTGGGAGATTAAGTGTTTCAAAAGATTCGGATGTTCAATCTACTGGTGGAAATGGACATCAGAGCAAGCATGCTAGAAGTCCTAAGCAAGATGTGGAAGAAATAGAAGCTTACCGAGCATCCTTTGGTTTCAGTGCAGATGAGATTATAACTACCACTCAATATGTGGAAATTTCTGATGTAACGGAGGACTCATTTACCATGATGCCCTTTGCTTCTGGTAAGTCAACAATGGAAGAAAGCATAGAGCCTTCATTAATGAAAGGATTCAAAGCTCAGGAGACGCAGGTGGCATTGCAGAGTCTGAGAAGTCTTAGATCAGATCCAGGTCCAGTAGGCAAGGAAGCACACAATCAGGCCCCTATATGTCAAGGATACGAAGATCATAAATCACAAGGGCATTGTAGCAACAGCTCTGGATTAAGTACACCAGACAACCGTACCCTCGGAGATGATGAGGATATATTCTCAAAAATGGAATCTTCAAGAATCAGCAGGAAATATCAGATGGGGTTATCGTGCTCTGATGCTGAGGTTGACTataggagaggaagaagctTACGAGAAGGAAAGCGAATGTGA 1092 0.4231 MYATGPYAHETQLVSPPVFSNFTTEPSTAPLTPPPELAHLTTPSSPDVPFAHFLSSSVDLKNSDKGNYITANDLQATYSLYPGSPASSLISPISRNSGDCLSSSFPEREFRPQWDSSLSPENGKYQRTGSGRVSGHDTNGVTMASQDTNFFCPATYAQFYLDQNPPFPHNGGRLSVSKDSDVQSTGGNGHQSKHARSPKQDVEEIEAYRASFGFSADEIITTTQYVEISDVTEDSFTMMPFASGKSTMEESIEPSLMKGFKAQETQVALQSLRSLRSDPGPVGKEAHNQAPICQGYEDHKSQGHCSNSSGLSTPDNRTLGDDEDIFSKMESSRISRKYQMGLSCSDAEVDYRRGRSLREGKRM 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g0002 363 MobiDBLite consensus disorder prediction 115 134 - -
Ssu5g0002 363 MobiDBLite consensus disorder prediction 176 193 - -
Ssu5g0002 363 MobiDBLite consensus disorder prediction 167 202 - -
Ssu5g0002 363 PANTHER OS01G0103800 PROTEIN 1 362 - -
Ssu5g0002 363 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 362 IPR040420 -
Ssu5g0002 363 MobiDBLite consensus disorder prediction 296 323 - -
Ssu5g0002 363 MobiDBLite consensus disorder prediction 98 134 - -
Ssu5g0002 363 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g0002 Ssu-Chr5 16015 17492 Transposed