Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3513 ATGGGACCGAATTCCATCAGACTCAGAATGTTCTTTGTTATAGCTTTCCCTGTCGTTGTTATAGTTACTTTAAAGTTCCGAAACTCTAGTTTCGAACTTTTCGAGGGGTTTTCTGAAGTCAAGGTAGAAGGAGGAACAGCTCAGAACGTTACTGCTGAGTTGTTGACTGGTGGACCAAACGTTACAACTCATGGCTTTGAATTGGGAGGAACAGTCCAAGATATAACTCATGACAGCTtaggaggaaaagaagggaataATAACCGTGTCAGCAGTGGAGCTAAGGACCTGCAAGGGAGATCTCAAAATGATACCGCTACTGAAGGAAGAACTAAGAATATTACAGCAGCAGATGGTGGCTTGAAAACCGCTTCATTGACAAGTTCAACAAATGACCCAACACCACATGCTGTTAATCTTGATGACAAACTGCTTGGTGGACTGTTAACCTCTGGATTTGATGAAGCATCATGCAAAAGTAGGATACAGTCCCACTTATACCGCAAAGCTTCTCCTCACAAACCTTGTCCATATTTGATATCTAAACTACGTAGCTATGAAGAAATTCATAGAAGGTGCGGACCTAATAATAGAGCTTACGACAGAAGCATGAGAAAGATCGTACACTCCAAGAACAATGTTGTTGCTACAATGTGTAAGTACGTTATCTGGACACCTATTAATGGTTTGGGCAACCAAATGCTTAGCTTGGCAGCAACATTTCTTTATGCCATCCTCAATGATCGAGTGCTACTTGTAAAATTTGGGAAAGACAAGCATGGCCTATTTTGCGAGCCGTTTCTCAATTCTACTTGGTTACTGCCTGAGAAGTCTCCTTTCTGGAATGAAAAGCATATCGAAACATATCAGATCCTGCTAGAGAAGGATAGGGCTAGCAATTCAACGGAGGATTTACCATCTGTTCTGTTTGTCAATCTACAACACTCCCGCGGTGACCCTGAGAAATTTTTTCACTGTGACCATAGTCAAGATCTTCTCCGGAATATCCCTTTGTTGATTTTGCAGTCTGATCAATTCTTTGTCCCTTCCCTGTTCATGACCCCATATTTCAACCTGGAGATTACCAAAATGTTCCCAGAGAAAGACACAGTTTTCCACCATTTGGGTCGCTACCTTTTTCACCCTTCAAATGAGGCATGGGAACTAATCAGCTGGTACTATCAGGCACACCTGGCCAAGGCAAGTGAGCGGATAGGCATACAGATAAGAGTATTTGATCCTGTCTCCACTCCACAGAAAACAGTTATGGATCTAGTTTTAAGCTGCACCTTAAAACATAAGTTACTCCCAGAAATAGGTTTGCCAAATCCAATGTCTTCTACCGGGAAAAACCAGAGTGTAAAGTCAGTTCTTGTGGCATCTCTATATCCAAAGTATGGTGATAGTTTGCGGACTATGTATCTGAAGAAACCAACAATTACTGGGGAACTCATACAAGTTTATCAGCCAAGTCATGAAGGGAAACAAAAGTTTAATGATAATAAGCATAATATGAAAGCTTGGATGGACATGTATCTACTAAGTTTATCTGATGTGTTGGTGACAACCTCTCTCTCTACTTTTGGCTATGTTGCTCAGGGATTGGGAAATTTGAAGCCGTGGCTTCTTTACAGGCTAATAAAAAACGACACCCTTTTTCCATCCTGTAAAAGGGATTTCTCATCGGAGCCTTGTTATCATGTTCCTCCCAAGCATTACTGCAACGGAAAGCCCATGAAAGATTTCGTTTCTTCTTTCCCCTATTTGAGGGAGTGCAAGGATTATTGTTTTGGTGTGAAGCTGGTTAACGATTCTATgtag 1821 0.4086 MGPNSIRLRMFFVIAFPVVVIVTLKFRNSSFELFEGFSEVKVEGGTAQNVTAELLTGGPNVTTHGFELGGTVQDITHDSLGGKEGNNNRVSSGAKDLQGRSQNDTATEGRTKNITAADGGLKTASLTSSTNDPTPHAVNLDDKLLGGLLTSGFDEASCKSRIQSHLYRKASPHKPCPYLISKLRSYEEIHRRCGPNNRAYDRSMRKIVHSKNNVVATMCKYVIWTPINGLGNQMLSLAATFLYAILNDRVLLVKFGKDKHGLFCEPFLNSTWLLPEKSPFWNEKHIETYQILLEKDRASNSTEDLPSVLFVNLQHSRGDPEKFFHCDHSQDLLRNIPLLILQSDQFFVPSLFMTPYFNLEITKMFPEKDTVFHHLGRYLFHPSNEAWELISWYYQAHLAKASERIGIQIRVFDPVSTPQKTVMDLVLSCTLKHKLLPEIGLPNPMSSTGKNQSVKSVLVASLYPKYGDSLRTMYLKKPTITGELIQVYQPSHEGKQKFNDNKHNMKAWMDMYLLSLSDVLVTTSLSTFGYVAQGLGNLKPWLLYRLIKNDTLFPSCKRDFSSEPCYHVPPKHYCNGKPMKDFVSSFPYLRECKDYCFGVKLVNDSM 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3513 606 Gene3D - 216 302 - -
Ssu4g3513 606 Gene3D - 390 544 - -
Ssu4g3513 606 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 9 606 - -
Ssu4g3513 606 Pfam Xyloglucan fucosyltransferase 127 574 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu4g3513 606 PANTHER FUCOSYLTRANSFERASE 2-RELATED 9 606 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu4g3513 606 MobiDBLite consensus disorder prediction 77 110 - -
Ssu4g3513 606 MobiDBLite consensus disorder prediction 80 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3513 Ssu-Chr4 86134951 86137242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3513 135 602 Xyloglucan Fucosyltransferase1 AT2G03220 49.263 2.11e-155 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3513 K13681 - gmx:100818288 916.376