Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3512 ATGGAAATCTTCCAAGCCACAGCAGACAAGTTGGGGACGAGTtccaagagatttacaacattcTTTGTTGTATTTTTCATATCATTTCCGGTTGTTCTCATAGTTTCTTCGATGTACCGAAACTCAAGGTTCGGTATTTTTGAGGGGTTATCCAAAACTGAGTTGTTGGGTAGAGGGCAAAGCCAAAACGTTACAACCAATGGCTTTCCGTTGGGAGGAAGAGTCCAAAATATATCAGATGAGAACTTAAGAGGAAGATACAATAATAATACCGTGTCGGTGGTGTTGCCAGGCAAGTTTCAAAATGGTACCGCTACAGAAGAAGGAACTACAACTAAGAAAGAACTAGGTGGAGTTAAGGGCCTGCACCGGAGGTCTGAAAATGATACCGCTACTGAAGGAAGAACTAAGAATATTACAGCAGCAGATGGTGGTTCGACAAACGCTTCATCGACGAGTTCAACAAATGACTCAAGTCCTCGTGTAGTTAATCCTGATGGCAAAGACAAACTGCTTGGTGGACTTTTAACCTCGGGATTTGATGAAGCATCATGCATAAGCAGGGTGCAGAGCCACTTGTACCGCAAAGCTTCTCCTCACAAACCTTGTCCATATTTGATATCTAAACTACGTAACTACGAAAAAATTCATAGAAGGTGCGGACCTAATAGTAGAGCTTACGACAGAAGCATGATAAAGATTGTACGCTCCAAGAACAATGGTGCTGCTACAATGTGTAAATACCTTATCTGGATGCCTGTCAATGGTTTGGGCAACCAAATGATTAGCATGGCTGCAACATTTCTTTATGCTATGCTCACCGATCGAGTGCTGCTTGTAAAATTTGAGAAAGACAAGCATGGCCTATTTTGCGAGCCGTTTCTCAATTCAACTTGGATATTGCCTGAGAAGTCCCCCTTTTGGTCTTGGAATGAAAAGAATACCGAAACATATCAGATCATGCTAGAGAAGGACAGGGCTAGCAATTCAAAGAAGGATTTACCATCAGCTCTGTTTATTAATCTACAACACTCCTCCCGCATTGACCCCGAGAAATTTTTTCACTGTGACCATAGTCAAGATCTTCTCCGGAAGGTCCCTTTGTTGATTCTGAGGTCTGATCAATACTTTGTTCCCTCTCTGTTCATGAACCCATTTTTCAACGTGGAGATTACCAAAATGTTCCCAGAAAAAGACACAGTTTTCCACCATTTGGGTCGCTACCTTTTTCACCCTTCAAATGAGGCATGGGAACTAGTCAGCTGGTACTATCAGGCACACCTGGCCAATGTAAGTGAGCGGATAGGCATACAGATAAGAGTATTTGATCCTGCTTCCACTCCACAGAAAACAGTTATGGATCTAGTTTTAAGCTGCACCTTAAAGCATAAGCTACTCCCTGAAATAGGTTTGCCAAATACAATGTCTTCTACCGGGAAAAACCAGAGGGTAAAGTCAGTTCTTGTGGCATCTTTATATCCAGAGTATGCTGATAATTTACGGACTATGTATCTGAAGAAACCAACAGTTACTGGGGAACTCATACAAGTTTATCAGCCAAGTCATGaaggaaaacaaaagtttaatgATAATAAGCATAATATGAAAGCTTGGATGGACATGTATCTACTAAGTTTATCTGACGTGTTGGTGACTACCTCTCTCTCTACTTTTGGCTATGTTGCTCAGGGATTGGGAAATTTGAAGCCCTGGCTTCTTTTCAAGCTAGTCGGTAACAGGACCCATTTTCCACCCTGTAAACGGGATTTCTCATCGGAGCCTTGTTATCATATTCCTCCCACACATTACTGCAACGGAGAGCCCATAAAAGATTTCGTTTCTTCTTTCCCCTATTTGAGGAAGTGCAAGGATTTTAGTTTTGGTGTGAAGCTGGTTAACGGTTCTATGTAG 1911 0.4118 MEIFQATADKLGTSSKRFTTFFVVFFISFPVVLIVSSMYRNSRFGIFEGLSKTELLGRGQSQNVTTNGFPLGGRVQNISDENLRGRYNNNTVSVVLPGKFQNGTATEEGTTTKKELGGVKGLHRRSENDTATEGRTKNITAADGGSTNASSTSSTNDSSPRVVNPDGKDKLLGGLLTSGFDEASCISRVQSHLYRKASPHKPCPYLISKLRNYEKIHRRCGPNSRAYDRSMIKIVRSKNNGAATMCKYLIWMPVNGLGNQMISMAATFLYAMLTDRVLLVKFEKDKHGLFCEPFLNSTWILPEKSPFWSWNEKNTETYQIMLEKDRASNSKKDLPSALFINLQHSSRIDPEKFFHCDHSQDLLRKVPLLILRSDQYFVPSLFMNPFFNVEITKMFPEKDTVFHHLGRYLFHPSNEAWELVSWYYQAHLANVSERIGIQIRVFDPASTPQKTVMDLVLSCTLKHKLLPEIGLPNTMSSTGKNQRVKSVLVASLYPEYADNLRTMYLKKPTVTGELIQVYQPSHEGKQKFNDNKHNMKAWMDMYLLSLSDVLVTTSLSTFGYVAQGLGNLKPWLLFKLVGNRTHFPPCKRDFSSEPCYHIPPTHYCNGEPIKDFVSSFPYLRKCKDFSFGVKLVNGSM 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3512 636 MobiDBLite consensus disorder prediction 113 132 - -
Ssu4g3512 636 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 14 636 - -
Ssu4g3512 636 Gene3D - 420 572 - -
Ssu4g3512 636 Gene3D - 243 297 - -
Ssu4g3512 636 PANTHER FUCOSYLTRANSFERASE 2-RELATED 14 636 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu4g3512 636 MobiDBLite consensus disorder prediction 133 162 - -
Ssu4g3512 636 MobiDBLite consensus disorder prediction 99 168 - -
Ssu4g3512 636 Pfam Xyloglucan fucosyltransferase 149 604 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3512 Ssu-Chr4 86125869 86128940 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3512 160 632 Xyloglucan Fucosyltransferase1 AT2G03220 49.686 7.19e-158 463
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3512 K13681 - gmx:100787812 874.774