Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3508 ATGAACCCATTTTTCAACGTGGAGATTACCAAAATGTTCCCAGAAAAAGACACAGTTTTCCACCATTTGGGTCGCTACCTTTTTCACCCTTCAAATGAGGCATGGGAACTAGTCAGCTGGTACTATCAGGCACACCTGGCCAATGTAAGTGAGCGGATAGGCATACAGATAAGAGTATTTGATCCTGCTTCCACTCCACAGAAAACAGTTATGGATCTAGTTTTAAGCTGCACCTTAAAGCATAAGCTACTCCCTGAAATAGGTTTGCCAAATACAATGTCTTCTACCGGGAAAACCAGAGGGTAA 306 0.4281 MNPFFNVEITKMFPEKDTVFHHLGRYLFHPSNEAWELVSWYYQAHLANVSERIGIQIRVFDPASTPQKTVMDLVLSCTLKHKLLPEIGLPNTMSSTGKTRG 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3508 101 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 99 - -
Ssu4g3508 101 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 99 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu4g3508 101 Pfam Xyloglucan fucosyltransferase 3 96 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3508 Ssu-Chr4 86099442 86099747 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3508 1 86 Xyloglucan Fucosyltransferase1 AT2G15350 59.302 1.96e-32 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3508 K13681 - gmx:100809919 156.377