Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g3507 ATGCTCACCGATCGAGTGCTGCTTGTAAAATTTGAGAAAGACAAGCATGGCCTATTTTGCGAGCCGTTTCTCAATTCAACTTGGATATTGCCTGAGAAGTCCCCCTTTTGGTCTTGGAATGAAAAGAATACCGAAACATATCAGATCATGCTAGAGAAGGACAGGGCTAGCAATTCAAAGAAGGATTTACCATCAGCTCTGTTTATTAATCTACAACACTCCTCCCGCATTGACCCCGAGAAATTTTTTCACTGTGACCATAGTCAAGATCTTCTCCGGAAGGTCCCTTTGTTGATCTGA 300 0.4267 MLTDRVLLVKFEKDKHGLFCEPFLNSTWILPEKSPFWSWNEKNTETYQIMLEKDRASNSKKDLPSALFINLQHSSRIDPEKFFHCDHSQDLLRKVPLLI 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g3507 99 Pfam Xyloglucan fucosyltransferase 1 99 IPR004938 GO:0008107|GO:0016020|GO:0042546
Ssu4g3507 99 PANTHER GALACTOSIDE 2-ALPHA-L-FUCOSYLTRANSFERASE-LIKE PROTEIN 1 99 - -
Ssu4g3507 99 PANTHER FUCOSYLTRANSFERASE 2-RELATED 1 99 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g3507 Ssu-Chr4 86099110 86099409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g3507 1 99 Xyloglucan Fucosyltransferase1 AT2G03210 37.864 5.83e-15 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g3507 K13681 - gmx:100787812 172.555