Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1680 ATGTTTCTGCAGATGGAATCTGTTAAGCCATCAGCAGTGACACCAAGCAAGAGCAAATTGGCTCGCACTTTCGCCAAAGTTCTTCATGTTAGAGCAGTGACTGGAATTGCACCAGTCGATGGACTGAAGAATGTTAAAGTTGATGCAGATCTCAACAATGAAGCAAATATGTGTAAGAGTGCAATAAACAAAGAAGATGAAGTGCTTCAGAAAAGAAAGGCCACAGAAGCATTGCTTGCAAACATTTTTGCTAGCATTTCAACTGTTAAAGCTTCATATGCTCAGCTACAGTATGCTCAGTCTCCTTACGACCCTGATGGAATTCAAGCTGCTGATCAATTGATAGTCTCAGAGTTCAAGACCTTGTCTGAGCTAAAGCAATGTtactttaaaaaacaatttgatCCCTCACCAGATAGAGCAATTCTTGCAGCCAAATCAAAGGAGCTGCAGAGTGTTAACAGAACCTTTGAGATTACAGCGAAGAAGTTAGAATCGCAGGCGCGGCTCAAGGAATCCGAGATTATATATCTCCGAGAAAAGCTAGAGGAAGCTAATGTGCAGAACAGGTCAATTGAGAAGAGGTTAAGTCAAAGTGGGTCATTATCCGTTCTTGATAATCTTCATATGTCAGGACTAAGGCCTAGCCATTTTGTTACTGTTCTTCGCCATGCGGTTAGGTCCATTCGGAGCTTTGTGAAACTGTTAGTGAATGAGATGAGATCTGCTGGTTGGGATATTGATGCTTCAGTCAATGCTATCATTGAGCAGAATGTGGTTTACTGGAAAGAAGATCACAAGTGTTTTGCAATTGAGTCCTTTGTTTGCAGGGAGATGTTTGATTCATTCAACTTCCCTAATTTCTCTCTACCTAATGAGTCTCTACCAGATAGGAACAAGAGGCAACTGTTCTTTGGGAGGTTCAATGAGTTAAAATCTGTGAAAGCAAAGGAGTTTCTTGCAGAGAAGCCAAGATCACCATTTGCAAAATTTTGCAGGATCAAGTATTTGAGACTTGTTCATCCCAAGATGGAGGCATCATTTTTTGGTAACCTGAATCAGAGAAACCTGCTGAATGCTGGGGAGTTTCCTGACACCAACTTCTTCACATCATTTGCTGAGATGGCCAAGAGGGTTTGGCTCCTGCATTGCCTGGCCTTTTCTTTTGAGCCTCAAGCTTCAATCTTTCAAGTGGGGAAGGGGTGTAGATTCTCTGATGTGTACATGGAGAGTGTGaatgaaaatgatgaagaaaTGCCAGTGGAATCTGAGCCACAAGTTGCTTTCACTGTGGTTCCAGGGTTTAGGATTGGTAAAACGCTGATACAGTGCCAAGTCTACCTCTCACAGCACCAAGGCaaagtaaaaaatttcacaTCCACAAGGCGAAGGTAG 1395 0.4136 MFLQMESVKPSAVTPSKSKLARTFAKVLHVRAVTGIAPVDGLKNVKVDADLNNEANMCKSAINKEDEVLQKRKATEALLANIFASISTVKASYAQLQYAQSPYDPDGIQAADQLIVSEFKTLSELKQCYFKKQFDPSPDRAILAAKSKELQSVNRTFEITAKKLESQARLKESEIIYLREKLEEANVQNRSIEKRLSQSGSLSVLDNLHMSGLRPSHFVTVLRHAVRSIRSFVKLLVNEMRSAGWDIDASVNAIIEQNVVYWKEDHKCFAIESFVCREMFDSFNFPNFSLPNESLPDRNKRQLFFGRFNELKSVKAKEFLAEKPRSPFAKFCRIKYLRLVHPKMEASFFGNLNQRNLLNAGEFPDTNFFTSFAEMAKRVWLLHCLAFSFEPQASIFQVGKGCRFSDVYMESVNENDEEMPVESEPQVAFTVVPGFRIGKTLIQCQVYLSQHQGKVKNFTSTRRR 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1680 464 PANTHER OS01G0203800 PROTEIN 5 448 - -
Ssu3g1680 464 PANTHER PROTEIN GRAVITROPIC IN THE LIGHT 1 5 448 IPR040225 GO:0009639|GO:0009959
Ssu3g1680 464 Coils Coil 175 195 - -
Ssu3g1680 464 Pfam Plant protein of unknown function (DUF641) 71 195 IPR006943 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1680 Ssu-Chr3 49895702 49897096 Dispersed/Wgd