Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1620 ATGGAACCGGCATCGTCGGAGCACCGAAGCTACTGGCGGTGGAGCAAGCGAGACTTCTTCCCGGAGAAGTCATTCGAGAACGGGAAATCCTACCGCGCTGCCCTGGCTGCCACGTGTCCGCGCCTCAGGGATCGTCTCCTGAGCCGCTCCAGCGACTCGCACGAGCTCCTCGTGCTCCCACGTGCCAGCGAGCACCGCATGAACCGCTGCCTCACCTGGTGGGACCTCACCTGGCTCGCCTTCGGCTCCGTCGTCGGCTCCGGCATCTTCGTCGTCACCGGCCAGGAGGCCCGCCTCCGTGCCGGCCCAGCCATCGTCCTCTCCTACGCCGCCTCTGGCTTCTCCGCCCTCCTCTCCGCTCTCTGCTACACCGAGTTCGCCGTCGACGTCCCCGTCGCCGGCGGCTCCTTCTCCTTCCTCCGCATCGAGCTCGGCGACTTTCTCGCCTTCGTCGCCGCCGGCAACATCATGCTCGAGGCCCTCGTGGGGGCCGCCGGCCTTGGCCGCTCCTGGTCCTCCTACTTCGCCAGCATGGTGAAATCCGACCCGGATTTCTTCCGGATCCGGGTCCCCTCCTTCACACCCGGGTTCGACATGCTCGATCCTTTGGCCGTTGCCGTTCTCCTCATCGCGAACGGTATTGCCGTTAGCGGCACCCGCAAAACCTCCGTCTTAACCTGGCTCAGTTCCGTCATCACCACGTTGGTGATCGCATTCATTATTGTAGTCGGGTTCGTTCACGGAAAGGCGTCGAACTTGACGCCGTTTTTCCCTTACGGCGTTGACGGCGTTTTCAAAGCCGCGGCTGTGGTGTATTGGTCGTACACCGGTTTCGACATGGTGGCCACGATGGCTGAAGAGACCAAGAACCCTTCGAGGGATATCCCTATTGGTTTGGTTGGGTCGATGACGATGATTACGGTTATTTACTGCTTGATGTCTTTGTCGCTTGTGACGATGGTTAAGTACTTGGAGATTGACGTGGACGCCGCTTACTCCGTGGCTTTTGTTCAGATTGGGATGACTTGGGCTAAGTACCTTGTGAGCGTTTGTGCGTTGAAGGGAATGACCACTAGCTTGCTTGTTGGGTCCATGGGGCAAGCTAGGTACACGACTCAGATTGCGAGGTCGCACATGATCCCACCCTTTTTCGCGCTAGTTCACCCCAAGACAGGAACCCCTATTAATGCCACTCTGTTGACCACTATTTGTAGTTCTGTGGTCGCTCTTTTCTCTAGCTTGGATGTTTTGTCTAGTGTTTTCTCTATCAGCACGCTTTTCATTTTCATGCTTATGGCCGTTGCGCTACTTGTGAGGCGGTATTATGCGAGGGACAGCACGGGGAAGGGTGAGTTGGTGAGAGTTGTTGTGTGCTTGTTGGTAATTGTTGGTTCTGCTGCTGTGGGGGCTGCGCTTTGGCACTCGGCGAAGCTGGGTTGGATCGGCTACGCGGTGGCTGCTTGTGTTTGGTTTTTGGGCACGTTGGGAATGAGTTTCCTTCCCAAGCAGAGGGCTCCCAAGGTGTGGGGGGTTCCGTTGGTTCCGTGGTTGCCCTCCTTGTCCGTTGCGACCAACCTCTTTCTCATGGGCTCCTTGGGCTCTCAGGCTTTCTGGAGGTTCTTAATTTGCACTGCTTTCATGtttgtgtattatttttttgtggccGTCCATGCAACTTATGATGTGGAACATCAAGATAATGGTCGAGAAGGAAAGAATGACGAGGGAGCGGAAGGTACCAATCAAGGGGTACTATAG 1758 0.562 MEPASSEHRSYWRWSKRDFFPEKSFENGKSYRAALAATCPRLRDRLLSRSSDSHELLVLPRASEHRMNRCLTWWDLTWLAFGSVVGSGIFVVTGQEARLRAGPAIVLSYAASGFSALLSALCYTEFAVDVPVAGGSFSFLRIELGDFLAFVAAGNIMLEALVGAAGLGRSWSSYFASMVKSDPDFFRIRVPSFTPGFDMLDPLAVAVLLIANGIAVSGTRKTSVLTWLSSVITTLVIAFIIVVGFVHGKASNLTPFFPYGVDGVFKAAAVVYWSYTGFDMVATMAEETKNPSRDIPIGLVGSMTMITVIYCLMSLSLVTMVKYLEIDVDAAYSVAFVQIGMTWAKYLVSVCALKGMTTSLLVGSMGQARYTTQIARSHMIPPFFALVHPKTGTPINATLLTTICSSVVALFSSLDVLSSVFSISTLFIFMLMAVALLVRRYYARDSTGKGELVRVVVCLLVIVGSAAVGAALWHSAKLGWIGYAVAACVWFLGTLGMSFLPKQRAPKVWGVPLVPWLPSLSVATNLFLMGSLGSQAFWRFLICTAFMFVYYFFVAVHATYDVEHQDNGREGKNDEGAEGTNQGVL 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1620 585 Pfam C-terminus of AA_permease 509 558 IPR029485 -
Ssu3g1620 585 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 9 573 - -
Ssu3g1620 585 PANTHER CATIONIC AMINO ACID TRANSPORTER 8, VACUOLAR 9 573 - -
Ssu3g1620 585 Pfam Amino acid permease 71 474 IPR002293 GO:0016020|GO:0022857|GO:0055085
Ssu3g1620 585 Gene3D Amino acid/polyamine transporter I 65 500 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1620 Ssu-Chr3 45645659 45647416 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu3g1620 6 565 Organic Solute Cotransporters AT1G17120 70.536 0.0 810