Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g0068 ATGAATTGTTATAAACTTCAGCAGAATGCCTTCTCAGCCTGTGAAGAGATGAGAGGCTCTCTTCCCATTGCTGATCAGAATGGCCCTGTCATTTGCCCTAAGCCACGCCGAGCTGAGGTTTTAATGAACTTGCCCATACGACCATTAAAATGGCATTTAAGtcaACAAGCTGAGGGGTCTGATTCAAAAGCTGGGGCAGAGCTACTCGACATTGTTCTCAAGAGGGAGGGTTATGGGGAAGAATTTGCAAATCAGTTACCTTCGTCTCCTCTGTATATTTGTGGTTCTCCTCCAGTTCGGGTTGCTAATCCCTTGATCCAAGATGCTCGATTTGGAGATGAAGAGAACACTCTTGTATCGACAATTTCATCACCTTCAGGTTTACTGTCTCCATCTTCAGCGTCTCGCAAAGGAGGATGTGTTAGGATGAAGTTTGGACTTAAACCGGCTGCAGTTAGAGTAGAAGGATTTGATTGCCTCAGCAGGGATTGCCAGAATTCCGGCATCCCGGCTGTCGCTTAA 522 0.4598 MNCYKLQQNAFSACEEMRGSLPIADQNGPVICPKPRRAEVLMNLPIRPLKWHLSQQAEGSDSKAGAELLDIVLKREGYGEEFANQLPSSPLYICGSPPVRVANPLIQDARFGDEENTLVSTISSPSGLLSPSSASRKGGCVRMKFGLKPAAVRVEGFDCLSRDCQNSGIPAVA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g0068 173 PANTHER EXPRESSED PROTEIN 1 173 - -
Ssu3g0068 173 PANTHER BNAC02G06400D PROTEIN 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g0068 Ssu-Chr3 1337906 1339022 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g0068 3 1337906 1339022 Ssu5g3358 5 83508641 83509799 ECH
Ssu3g0068 3 1337906 1339022 Ssu3g0068 3 1337906 1339022 ECH
Ssu7g0319 7 5392202 5392963 Ssu3g0068 3 1337906 1339022 ECH