Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g3184 ATGGATGGCAAACTACACATAATGTTTTTTCCGTTCCCGGGTCAGGGGCACATGATACCGATGGGTGAAATGGCGAGAGCATTTAGTGGAAGAGGGGTGAGGGCAACCATAGTGACGACTCCACTCAACGTATGCAGTATTGGTGGTGGATCAGAGATAGAAATCCTAAGCATCGAATTCCCGTGTGCAGAGGCTGGCTTACCGGAGGGATGCGAAAATGCAGAGTCAATCCCCTCCCCAGCCTTCATACCTGCCTTCTTCAAGGCAACGACGATGCTGCAAGCCCCCTTGGAAGACCTCCTCCTTCAACACCATCCCCATTGCCTTGTTGCTAGTGCTTTGTTCCCGTGGGCAGCTCAGTCCGCCGATAAATTCAAAATCCCAAGGCTCGTGTTTCACGGCACGGGTGTGTTCGCGTTATGTGCTTCAGAATGTGTGCGACTCTACCAGCCCCACAAGAATGTTTCTTCTGACTCCGACCCCTTTCTTATTCCTCATCTTCCCGGAGAGATCAAGATCACAAGGATGGCGTTGCCCGATTACGTTAAAACCGATGAGGAAACTGACTTCACCAGAGCGGCCCGGGCAATCAAGGAATCAGAGCTCACAAGCGCCGGGGTGCTTGTCAACAGCTTTTACGAACTGGAGCAGGTGTACGCCGATTATTACAACAAGCAGCTGCTACAGGGAAGGAACGTGTGGTACATAGGTCCACTTTCTCTCTgcaaccaaaaccaaaaccaaaaccaagaCAAGCCCAAGAGAGGAAAGCAAGCTTCGGTTGATGAAGGAGACATTTTGAACTGGCTCGACTCCAAGAAACCCAACACGGTCGTCTACGTTTGTTTTGGAAGCATAGCAAACTTCAGCGAAACTCAGCTGAGAGAAATAGCAACGGGACTCGACGATTCGGGCCAACAATTCATATGGGTTGTGCGGAGAAGCGACAAAGGCTGGCTTCCGGAGGGCATAACCAGTAACACGCTTGAGAAGGCACTCCATCGTATAATGCTAGGGGAAGAAGCAGAGGCTATGAGAAACACAGCACACAAACTAGCGCAAATGGCAAGAACGGCTGTGGAACACAATGGATCATCTTATTCCCACTTGACTCATTTGATACAACACCTTCACTCCATTGCATCCCTTCATAATTAA 1158 0.4888 MDGKLHIMFFPFPGQGHMIPMGEMARAFSGRGVRATIVTTPLNVCSIGGGSEIEILSIEFPCAEAGLPEGCENAESIPSPAFIPAFFKATTMLQAPLEDLLLQHHPHCLVASALFPWAAQSADKFKIPRLVFHGTGVFALCASECVRLYQPHKNVSSDSDPFLIPHLPGEIKITRMALPDYVKTDEETDFTRAARAIKESELTSAGVLVNSFYELEQVYADYYNKQLLQGRNVWYIGPLSLCNQNQNQNQDKPKRGKQASVDEGDILNWLDSKKPNTVVYVCFGSIANFSETQLREIATGLDDSGQQFIWVVRRSDKGWLPEGITSNTLEKALHRIMLGEEAEAMRNTAHKLAQMARTAVEHNGSSYSHLTHLIQHLHSIASLHN 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g3184 385 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 5 378 - -
Ssu2g3184 385 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 324 378 - -
Ssu2g3184 385 PANTHER UDP-GLUCOSYL TRANSFERASE 73B2-RELATED 4 324 - -
Ssu2g3184 385 CDD GT1_Gtf-like 5 322 IPR002213 GO:0008194
Ssu2g3184 385 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 269 328 IPR002213 GO:0008194
Ssu2g3184 385 Gene3D Glycogen Phosphorylase B; 265 325 - -
Ssu2g3184 385 Gene3D Glycogen Phosphorylase B; 359 370 - -
Ssu2g3184 385 Gene3D Glycogen Phosphorylase B; 1 264 - -
Ssu2g3184 385 Gene3D Glycogen Phosphorylase B; 326 358 - -
Ssu2g3184 385 PANTHER GLYCOSYLTRANSFERASE 324 378 - -
Ssu2g3184 385 PANTHER GLYCOSYLTRANSFERASE 4 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g3184 Ssu-Chr2 94184976 94186394 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g3184 4 333 Glycosyltransferase AT2G15480 45.739 2.27e-99 302
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0421 7 7954233 7955012 Ssu2g3184 2 94184976 94186394 PCT