Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1536 ATGGGAACCAAGGTCCAGAATCTTCCAGGATATTACTCAATGAGAGATCTTAATGAGGAATCCAGCAGTTGTGGCTGGCCCCTATTTTATGGGGATAAATCACTCACAAATGGGcagtattataataattatctgcCAAGTTCTACAACAGAGGCTTGTTCTGTATATGATAAGGATGTTGTGAAGCGGATGATGCTGGAGCATGAGGCCATATTTAAGAATCAGGTCAATGAACTTCACCGTTTGTACAGAATACAAGAGGATTTGATGAATGAGTTTAAAAGGAAAGAATTACACAGAAACCAGATACCGGTTGAGGCATCATTTTCCACAGGTCCCATGAAATCTCAAGTAACGACTGAAGATGGACAAAAATGGCATATTTCTGGCTTTCCAGTGGGAAATTCTACTTGTGCTAAGACATCTGTGTCAGGAGTTGATGGCATTCATTCTCCTTTGGGTTCTATGAAAGGGATCAGCAAACAAACTAGTCCATTTCCATCACCAAATGGGTGTAGTTCAAAAGATCTTGAGGTGCTTGAGTCCAGACCCTCAAAGGTGAGGAGAAAAATGTTTGACCTTCAGCTCCCTGCTGATGAGTACATTGATCCTGAGGAAAGTGAAAAGCTCAGTGATGAAAAAACAAGTGATCCATCATTCTTTCTTCCTGATAGAAGCTGTAAAAATAGAAAGGAGGGTGATGCGAAACTTTTTTGTGGAAATGGTGGGAACACTGAGCAGTCTTTAAGGAGAAGAAATGGTTTGGCTGACTTAAATGAACCTGTTCAGGTGGAAGACACATTCAATGCTCCTTATGTTCATCTTCTGAGCCATAATCCCTGTCAAGGGGCAACTGAATGCTCTGATCTCTCTGCCGCTGCCAAACAAAAGTCACAGTTTTTTGGTTTGTCTAGGGAACAATTGCTCAACTCACATCATGGAACTGACAGTTGGGCTCGAAATAATGGATACTTGGAGAACAATGGGAGTGGAAAAGGGTGGTATCCATCAGTGGCTGAGGCAGGGCAAGCTAAAAGCAACACACAACCTGTTCCTCAAGTCCTCAAACTGGAAAAATCGCCTTTACCTTCCCAAACAATACAAGATGCACTTAGCAAGGTTTGTGAACCTGCATCTGATTATCTAAATGGTCGAAACAAGGCTGACATGTGGAGGGAAAAGACAGTTAGTGATTTACATATCGGTGAAAGAAATCATGAATACTCCATCAATAAGCATCCTGAGTCTGCGGTACCTTTACATAGACCTGGTCTTTTTGCAGCTGCTCCTTCCTCTGATTTATCCAAGTCTTGGTCTCATTCGGCTTCTTCTTGGGAAATGGCAACTAGCAGCCTAAGCCGGAAGTTGATGTCAATTCAGACACCTCCATGTCTAAATGCATCAGGTGCTTTGAGTAGGAGTTCCCAGTCACATCAAAGTAATGGGATTTTGGAAGATAATTGGCCCATGAATATCAATTCCAAGCCTAACCCAGGTTATCGATGTGATGTTCCTATACAGAATGGATTTTACCCTGGGTCTTCATCTGGGTCCAAGGCACCATCAACGAACTTCTCTTCAATTAGCTATGACTATCTCAATCATAATAATGATTGTAAGATAATTCCTTATCATTTCATCAACAATGGTTCATCAAAATCCTGTAAGGGTTCAAATTCAAACTTCAATGACATGAAGTCGGGAAAAGATATTGACTTGAATGTGCTGCTTCCCAATGGTTCATCCAACAACTTAGTTCCCCAGTCAGGTTTTGGGATAATGGATGGGGAACAGAAGAATGAGGACCGTCATGCGGTGTTGCCTTGGCTTAGAGGGAAGACAACTTGTAAGAATGAAGTACAAAACACTGCAGGAGAGTCAAGTTTATTCCATGCTGCTTCATTGTCCAACAAAGATGAAACTGGAAAGGGACCTAACGGAAAATTCATGCACAATTTAACTTCGGTTTGGTGTTCTAATAATATTGAGCCAAGAAGGATGGAGGTGAATGAAAGCTCTAGTAATAAGAAAATTCTTGGTGTTCCCATATTTGATATGCCTCATATTTCTCCTAAGAAGGAGTTGTCTTCAATCACCTCTCCCTCTGTGTCAGATCCTAATCCATCTGATGTAGAAGCAgctgaaaataagaaaaaacggATACTTGATATTAACTTGCCTTGTGATTCTGCTGTTTTTGAGTTGGACAAAGAAGCATTCACTGAAACTGCTGTTAGCAAGACAAGATCTCCTACAACAGAAGCAGACTCTAGAAATCAAATTGATCTGAACTTGAGTATGAGTGAGGATGAGGGATCTTTCACAACTATACCaagtgacaatataaaaatgaagGCAGAAATAGATTTGGAAGCTCCTGCTGTTCCCGAGACAGAGGAGGATGCCGTTCCTGAAGAAAAGCAGCTAGAAACTTCTCTAGCATCACCGCAAGTCCCACAAGAAACAGTTGAACAGCCAAAGGACGATGAACTTATGACAACTGCAGCAGAGGCAATTGTTGTCCTGTCATCTCTTTCTTGCGATCAAGTGGATGGTGTGATCAGCACTAGTCCTTCAGAAAGTCCAAAGGTGGACCTGTTAAGTTGGTTTGCAGACGTAGTTTCGTCATGCAAAGATAATCTGGAGGGCAAGTGTgatattttgagggaaaaagaTGGTGAGGACAACGAGGAGCGCTCCTCTGAAGGAATGGATTACTTTGAGGCAATGACATTGAAAATGCCAGAGACCAAGGAAGAAGACTACATGCCCAAGCCTCTTGTTCCTGAAAACTTCAAAGTGGAAGAAACAACTACTTTGTTACCAACTCGGACACGAAAAGGGCCAGCAAGGAGAGGGAGGCAAAGAAGGGATTTCCAAAGGGACATCCTTCCAGGCCTTGCATCTTTATCAAGGCATGAAGTAACAGAAGATCTTCAGACATTTGGAGGGCTTATGAGAGCAACAGGTTATTCATGGCATTCAGGATTAACTAGGAGAAGCTCATCTAGGAATGGCAGTGGTAGGGGGAGGCGGCGAGCGCAGGTTACCCCCTCTTCCCCGACACCGGCGCCAACCAATGAAACTAGCACCCGACTGATGCAGCAGCTTAATAATATTGAAGTTGGATTGGAGGATAGAAGCCTAACAGGTTGGGGCAAGACAACCAGAAGGCCCCGTAGACAGAGGTGCCCGGCCGGTAACCCTGCGTTGATCCCGTTAACCTAA 3228 0.4219 MGTKVQNLPGYYSMRDLNEESSSCGWPLFYGDKSLTNGQYYNNYLPSSTTEACSVYDKDVVKRMMLEHEAIFKNQVNELHRLYRIQEDLMNEFKRKELHRNQIPVEASFSTGPMKSQVTTEDGQKWHISGFPVGNSTCAKTSVSGVDGIHSPLGSMKGISKQTSPFPSPNGCSSKDLEVLESRPSKVRRKMFDLQLPADEYIDPEESEKLSDEKTSDPSFFLPDRSCKNRKEGDAKLFCGNGGNTEQSLRRRNGLADLNEPVQVEDTFNAPYVHLLSHNPCQGATECSDLSAAAKQKSQFFGLSREQLLNSHHGTDSWARNNGYLENNGSGKGWYPSVAEAGQAKSNTQPVPQVLKLEKSPLPSQTIQDALSKVCEPASDYLNGRNKADMWREKTVSDLHIGERNHEYSINKHPESAVPLHRPGLFAAAPSSDLSKSWSHSASSWEMATSSLSRKLMSIQTPPCLNASGALSRSSQSHQSNGILEDNWPMNINSKPNPGYRCDVPIQNGFYPGSSSGSKAPSTNFSSISYDYLNHNNDCKIIPYHFINNGSSKSCKGSNSNFNDMKSGKDIDLNVLLPNGSSNNLVPQSGFGIMDGEQKNEDRHAVLPWLRGKTTCKNEVQNTAGESSLFHAASLSNKDETGKGPNGKFMHNLTSVWCSNNIEPRRMEVNESSSNKKILGVPIFDMPHISPKKELSSITSPSVSDPNPSDVEAAENKKKRILDINLPCDSAVFELDKEAFTETAVSKTRSPTTEADSRNQIDLNLSMSEDEGSFTTIPSDNIKMKAEIDLEAPAVPETEEDAVPEEKQLETSLASPQVPQETVEQPKDDELMTTAAEAIVVLSSLSCDQVDGVISTSPSESPKVDLLSWFADVVSSCKDNLEGKCDILREKDGEDNEERSSEGMDYFEAMTLKMPETKEEDYMPKPLVPENFKVEETTTLLPTRTRKGPARRGRQRRDFQRDILPGLASLSRHEVTEDLQTFGGLMRATGYSWHSGLTRRSSSRNGSGRGRRRAQVTPSSPTPAPTNETSTRLMQQLNNIEVGLEDRSLTGWGKTTRRPRRQRCPAGNPALIPLT 1075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 199 225 - -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 796 827 - -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 469 489 - -
Ssu2g1536 1075 PANTHER - 1 1074 - -
Ssu2g1536 1075 Pfam Plant protein of unknown function (DUF863) 138 1065 IPR008581 -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 693 709 - -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 692 715 - -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 1045 1075 - -
Ssu2g1536 1075 MobiDBLite consensus disorder prediction 995 1031 - -
Ssu2g1536 1075 PANTHER DUF863 FAMILY PROTEIN 1 1074 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1536 Ssu-Chr2 62527390 62531515 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1536 2 62527390 62531515 Ssu2g1536 2 62527390 62531515 ECH