Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1534 ATGGTGCAAGGTGTGTCATTGAGCACTTTGGGAACCTGTGGAAAGAGCAGGCTCTGTGGATCCTCACCATTTTGGATGGCACCCTTTGAGCCATTCAAGAGATCCCAAATTACCTCTGCCACCGGTAGACACTTGGTTTGGAACCATTCTGTGCAGAGCTTGTTCTTAATCGGGTACCCTTATGTTTCAAGGCACAGTGGTTTTAGGGCTGAAGCAGCATGGATGTTTAGAGGGGGAGAACAAGGGTTGGATGCAAGTTCAGAGCACAGTGAGAGTGCTAATGAGGATATCTTGATGTTCTTCTTTCAGCTAGACTTGGCCACAAGAGTACAGTATGCTTTGAATATGGAGCAGTATGACATTGCACAGCAGCTGAGGAACAAACTTACTGAGGTTGAAGAAGAGGTAATCAAGCAACAACAGTCAAAAAGGGGATTATCTTCAAAAAGTGAAGCACAAGATAAAGCTCTAAGTATTATACGTCTTCATTCAGACCTCCAGAATGCTGTTGAGAATGAGGATTATGCCTTGGCTGCTGAATTACGTGACGAAATTTCCAAACTTGAAGCAGAATCTCTAGCTGCATCAGCTAAAGCTTTGGCACATGAAAATGCACTTTATGCATTCCGCTTGGGGCAGAAAGTaagacataaaaaatttgGTTATAAAGCTGTGATCTGTGGAATGGATCGAGTATGCTGTGAATCAAGTTCATGGATGGAAAATGCACAGGTTAAGAAATTGTCTCGTGGTTCCACTCAACCATTTTATCAGGTTCTCGTTGATGTACATTCTGAACCAAATCTATTGGTGGCATATGTTCCAGAGGAGAATCTTTTAGCCCCTGATAAACCAGACATGGGAAGATTTGATCATCCCTACATCTCTTTTCTATTCTATGGAATGGATTCAGCAGGAGATTTCATCCCAATTAAGCAACTACGGGAGAAGTACAATAGACCAAGGCATGAAATACCCATTGACCCACCAAATGATGAAGATGGAGGCAAAGCTTAA 1017 0.4218 MVQGVSLSTLGTCGKSRLCGSSPFWMAPFEPFKRSQITSATGRHLVWNHSVQSLFLIGYPYVSRHSGFRAEAAWMFRGGEQGLDASSEHSESANEDILMFFFQLDLATRVQYALNMEQYDIAQQLRNKLTEVEEEVIKQQQSKRGLSSKSEAQDKALSIIRLHSDLQNAVENEDYALAAELRDEISKLEAESLAASAKALAHENALYAFRLGQKVRHKKFGYKAVICGMDRVCCESSSWMENAQVKKLSRGSTQPFYQVLVDVHSEPNLLVAYVPEENLLAPDKPDMGRFDHPYISFLFYGMDSAGDFIPIKQLREKYNRPRHEIPIDPPNDEDGGKA 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1534 338 Pfam UvrB/uvrC motif 159 190 IPR001943 GO:0005515
Ssu2g1534 338 PANTHER SI:DKEY-261L7.2 87 334 - -
Ssu2g1534 338 Coils Coil 115 142 - -
Ssu2g1534 338 TIGRFAM yccV: hemimethylated DNA binding domain 207 308 IPR011722 GO:0003677
Ssu2g1534 338 Coils Coil 178 198 - -
Ssu2g1534 338 Gene3D - 206 308 IPR036623 GO:0003677
Ssu2g1534 338 SMART YccV_like_2_a 208 310 IPR011722 GO:0003677
Ssu2g1534 338 SUPERFAMILY YccV-like 208 304 IPR036623 GO:0003677
Ssu2g1534 338 PANTHER SI:DKEY-261L7.2 87 334 - -
Ssu2g1534 338 Pfam Hemimethylated DNA-binding protein YccV like 208 305 IPR011722 GO:0003677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1534 2 62428792 62431512 Ssu2g1534 2 62428792 62431512 ECH