Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1528 ATGATGGAGATGGAAGTGGACAGCGAGAAGAAGCAACAAGACGTGGAAGAGAAGGACTTGTTCAATGCTGCGGAAGAGGGAGACACGTCAACCTTCGAATCCCTCTCCCCTGAAACCCTCTCCAAAGCCCTCTCTCTCAGAAACGAAGACGCTCGCTCCCTTCTCCACGTCGCCGCCTCTTCCGGTCACACCCAGGTGGTGAAGATACTGTCATCTAGTGATGCTTCAGCTGGTGTGGTGAATTGTGCCGATGAGGAAGGGTGGGCGCCGCTTCACTCTGCAGCCAGCATTGGGAGTTTGGAGATAGTGGAGACTCTGTTGAGCAAAGGAGCTGATGTTAATCTGAAAAATGATGGGGGTCGCACTGCTTTACACTATGTGGCCAGCAAAGGGTGGTTGAAAATTGCTGAAATGCTCATCTCCCATGATGCCAAGATTAATATAAAGGATAAGGTTGGTTGCACTCCATTGCATCGGGCAGCTAGCACTGGGAAATCTGAGATGTGTGAACTTTTGATTGAAGAAGGAGCAGAGGTTGATGCTGTTGATAGAGCTGGTCAAACTCCTCTAATGAATGCTGTTATTTGCCATAACAAAGAgGTAGCCCTTCTTTTGATAAGACATGGAGCAGATGTGGATGTGGAGGACAAAGAAGGGTACACAGTGCTTGGTCGAGCTACAGATGAGTTTAGACCAATATTAATTGATGCTGCCAAGGCCATGCTTGAGTGA 732 0.4836 MMEMEVDSEKKQQDVEEKDLFNAAEEGDTSTFESLSPETLSKALSLRNEDARSLLHVAASSGHTQVVKILSSSDASAGVVNCADEEGWAPLHSAASIGSLEIVETLLSKGADVNLKNDGGRTALHYVASKGWLKIAEMLISHDAKINIKDKVGCTPLHRAASTGKSEMCELLIEEGAEVDAVDRAGQTPLMNAVICHNKEVALLLIRHGADVDVEDKEGYTVLGRATDEFRPILIDAAKAMLE 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat profile. 152 184 IPR002110 GO:0005515
Ssu2g1528 243 MobiDBLite consensus disorder prediction 1 35 - -
Ssu2g1528 243 Pfam Ankyrin repeats (3 copies) 20 117 IPR002110 GO:0005515
Ssu2g1528 243 Pfam Ankyrin repeats (3 copies) 119 182 IPR002110 GO:0005515
Ssu2g1528 243 SMART ANK_2a 152 181 IPR002110 GO:0005515
Ssu2g1528 243 SMART ANK_2a 86 115 IPR002110 GO:0005515
Ssu2g1528 243 SMART ANK_2a 50 82 IPR002110 GO:0005515
Ssu2g1528 243 SMART ANK_2a 119 148 IPR002110 GO:0005515
Ssu2g1528 243 SMART ANK_2a 185 214 IPR002110 GO:0005515
Ssu2g1528 243 Gene3D - 6 157 IPR036770 -
Ssu2g1528 243 PRINTS Ankyrin repeat signature 51 66 IPR002110 GO:0005515
Ssu2g1528 243 PRINTS Ankyrin repeat signature 102 116 IPR002110 GO:0005515
Ssu2g1528 243 Gene3D - 158 241 IPR036770 -
Ssu2g1528 243 MobiDBLite consensus disorder prediction 1 24 - -
Ssu2g1528 243 Pfam Ankyrin repeat 186 213 IPR002110 GO:0005515
Ssu2g1528 243 SUPERFAMILY Ankyrin repeat 20 227 IPR036770 -
Ssu2g1528 243 PANTHER ANKYRIN REPEAT-CONTAINING 19 151 - -
Ssu2g1528 243 PANTHER ANKYRIN REPEAT-CONTAINING 80 226 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat profile. 86 118 IPR002110 GO:0005515
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat region circular profile. 152 184 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat region circular profile. 50 81 - -
Ssu2g1528 243 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 50 19 151 - -
Ssu2g1528 243 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 50 80 226 - -
Ssu2g1528 243 PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 50 47 191 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat profile. 50 82 IPR002110 GO:0005515
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat region circular profile. 185 217 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat profile. 119 151 IPR002110 GO:0005515
Ssu2g1528 243 PANTHER ANKYRIN REPEAT-CONTAINING 47 191 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat region circular profile. 119 151 - -
Ssu2g1528 243 ProSiteProfiles Ankyrin repeat region circular profile. 86 118 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1528 2 62393538 62397334 Ssu2g1528 2 62393538 62397334 ECH