Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1522 ATGGATGTGAAAATAACCCTCCGTTGCTTTCTCCTTTTGTTATTTTCCCTATCTTCAGCAGAAGATGTGAAACTTAGAGTGAAAGGGGTGACAACCATTGCCACCAcagatgaaaattttatttgtgcAACTTTAGATTGGTGGCCTCCTAATAAGTGTGACTACAACCAATGTCCCTGGGGACAAGCAGGCATTCTCAATctgAGTTGCTACATTTCACATTACTTATCATTCAAAACTTTGGCAGCGTTTAATCCCCTGAGGATCAGATTAGGAGGTTCACTGGAAGATCAGATTATTTACCAATTTGGGAAGCAAAAGAAATGCCCCTCTTTCGAGAAGAAGGATGATGGTCTTTTTGGTTTCAGCGTAGGCTGCCTTCCCAGAAAGAGATGGGATGAagtacatgacttttttaacaAAACTGGAGTGAAATTAACTTTTGGGCTGAATGCTCTCACTGGAAAGACAAATTCCGCAGAGGACAAGTTGAACTGGGTGGGAGACTGGAATCCAAACAATGCCATAAGTCTCATGAAGTACACAATatcaaaaggatacaaaatagATTCTTATGAATTCGGAAATGAGCTATGTGCGGAGGGGGTATCAGCCAGAGTAGACAGCGTTCAATATGCTAAAGACATCACTAGGCTCAGACATATAGTTAATCTATTATACCCAAATGCTTCTCTAAGGCCTAAAGTGCTAGGCCCTGCTGGTTTCTATGATAAGGAATGGTTTGATAGCTTCTTACAAAATGTTGGACCTGGTGTGGTTGATGGAGTGACCCACCACATTTACAACCTTGGTGCTGGTGTTGACAAGGATCTTATCAAAAGGGTTCAAGACCCACATTTCTTAAGCAAAATTGCGAAAACTTACAAAAGTGTCACTGGAGCAGTCAAGGAATTCACGCCATGGGCAGCACCATGGGTTGGGGAAGCTGGTGGTGCCTATAACAGTGGTGGCAAAGATGTGTCTCATACTTTTGCTAATGGCTTTTGGTACTTGGGCCAGCTGGGCATGACATCAACCTTAAACCACAAGGTTTATTGTAGACAAACCCTGATTGGAGGAAACTATGGCTTGCTAAACACcacaaccttcattcctaaccCAGATTATTATGGAGCTCTTTTGTGGCATTGGCATATGGGAAGCGATGTGCTTTCTGTTTCTCATGACGGATCTCCATTTTTGCGTACATATGCTCATTGCTCAAAGAAAGGGCCTGGCATCATCGTGCTCCTCATAAACATGTCCAATTCCACTATTTTCAATGTATCCCTCGTCAATGACATGAATCTGTACCCGGAGACAGTAGACATGACGATGAGGGAAGAGTACCATTTGACACCCAAAGATGGAAACATTCAAAGTGATGTGGTGCGGTTGAATGGAACTCCACTAGAGCTTACCAAGTCACTGGACATCCCAGAAATGAAGCCAAAGCTGGTTGATCCATCTTCTCCAATCAAAGTGGGACCTGATTCaattgtgtttgtgcatagcaAGAGTTTCAATGCGCCGGCATGTCGTTAG 1545 0.4071 MDVKITLRCFLLLLFSLSSAEDVKLRVKGVTTIATTDENFICATLDWWPPNKCDYNQCPWGQAGILNLSCYISHYLSFKTLAAFNPLRIRLGGSLEDQIIYQFGKQKKCPSFEKKDDGLFGFSVGCLPRKRWDEVHDFFNKTGVKLTFGLNALTGKTNSAEDKLNWVGDWNPNNAISLMKYTISKGYKIDSYEFGNELCAEGVSARVDSVQYAKDITRLRHIVNLLYPNASLRPKVLGPAGFYDKEWFDSFLQNVGPGVVDGVTHHIYNLGAGVDKDLIKRVQDPHFLSKIAKTYKSVTGAVKEFTPWAAPWVGEAGGAYNSGGKDVSHTFANGFWYLGQLGMTSTLNHKVYCRQTLIGGNYGLLNTTTFIPNPDYYGALLWHWHMGSDVLSVSHDGSPFLRTYAHCSKKGPGIIVLLINMSNSTIFNVSLVNDMNLYPETVDMTMREEYHLTPKDGNIQSDVVRLNGTPLELTKSLDIPEMKPKLVDPSSPIKVGPDSIVFVHSKSFNAPACR 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1522 514 Gene3D Glycosidases 70 384 - -
Ssu2g1522 514 SUPERFAMILY (Trans)glycosidases 36 386 IPR017853 -
Ssu2g1522 514 PANTHER OS07G0598400 PROTEIN 12 513 - -
Ssu2g1522 514 Pfam Glycosyl hydrolase family 79, N-terminal domain 23 342 IPR005199 GO:0016020|GO:0016798
Ssu2g1522 514 PANTHER HEPARANASE-RELATED 12 513 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1522 Ssu-Chr2 62334443 62347454 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1522 2 62334443 62347454 Ssu2g1522 2 62334443 62347454 ECH