Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1515 ATGGACGACAAAGACAGAGCAGCCTCCTATCCTGCCGCCGCCGCTGAGTATGCCGGCGACACGAGTTGGACACTCGCCGCCGATGACTCCGACGGCGCGTACCTCTTCTCCGGCGACAGGGAGCGAAGCATACTCAGGGAATTCGGCTGGCACCTCGAACCGGACCAACCGAACCGGATCGGCACCGACGACGGACGGTGGATGCCGGCTCCCTCCTCTCTGACCAGTTCGACCGAACCGGCCGCCGCAGCGAATAACCAATCGGTGTCGTCGAGCTCCAGCGAGGATCCGCCGGAGAAATCCACCGTCTCCGACGAGAAACCGCCTGAGATTCCgaGTAAAGGTAAAAAGAAGGGGCAAAAGCGAGTACGGCAGCCACGGTTTGCATTTATGACCAAGAGTGAAGTTGATCATCTTGAGGATGGCTACAGATGGCGGAAGTATGGTCAGAAGGCAGTTAAAAATAGTCCTTTCCCTAGGAGCTACTACCGCTGCACAAACAGCAAATGCACGGTGAAGAAAAGGGTTGAACGCTCTTCCGAGGACCCAACAATTGTGATTACTACATATGAAGGCCAGCACTGTCATCATACCGTTGGATTTCCTCGAGGGGGAATCATTAGTCACGAAGCTGCCTTTGCGGGCCAGTTGGATCCTACAATGTCACGGTTCTATTATCCAATTCAATTACCCAGAGAGAATAATAACTTTAGCACATTTTCTCAGCCTTGCCAAGCACAGGATGAAGCTGGAGGATCCAGCGCTGTAATGCCAGCTGATGCATCGTCACAGCCTCCCACGGATGAAGGGTTGCTTGGAGATATTGTACCCCCGGGAATGCGCAACAATGAGAGAATTATTTGA 864 0.5347 MDDKDRAASYPAAAAEYAGDTSWTLAADDSDGAYLFSGDRERSILREFGWHLEPDQPNRIGTDDGRWMPAPSSLTSSTEPAAAANNQSVSSSSSEDPPEKSTVSDEKPPEIPSKGKKKGQKRVRQPRFAFMTKSEVDHLEDGYRWRKYGQKAVKNSPFPRSYYRCTNSKCTVKKRVERSSEDPTIVITTYEGQHCHHTVGFPRGGIISHEAAFAGQLDPTMSRFYYPIQLPRENNNFSTFSQPCQAQDEAGGSSAVMPADASSQPPTDEGLLGDIVPPGMRNNERII 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1515 287 MobiDBLite consensus disorder prediction 69 98 - -
Ssu2g1515 287 ProSiteProfiles WRKY domain profile. 134 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu2g1515 287 PANTHER WRKY TRANSCRIPTION FACTOR 57-RELATED 13 212 - -
Ssu2g1515 287 Gene3D WRKY domain 126 192 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu2g1515 287 SUPERFAMILY WRKY DNA-binding domain 131 197 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ssu2g1515 287 MobiDBLite consensus disorder prediction 237 275 - -
Ssu2g1515 287 Pfam WRKY DNA -binding domain 140 196 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ssu2g1515 287 MobiDBLite consensus disorder prediction 50 127 - -
Ssu2g1515 287 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 13 212 IPR044810 GO:0003700
Ssu2g1515 287 MobiDBLite consensus disorder prediction 99 116 - -
Ssu2g1515 287 SMART WRKY_cls 139 198 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1515 Ssu-Chr2 62135893 62139128 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ssu2g1515 WRKY 1.8e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1515 2 62135893 62139128 Ssu2g1515 2 62135893 62139128 ECH