Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1506 ATGTCCTCAATTGAGCAGAAGGAAGAGTCTAAGGGAAATGAGCAAAATGTTAAACTGATCAAGAGTTACTGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGCGGTGACATTCTGACTATTATAGACAAGCATCTGATTCCTTCTTCCACATCAGCAGAGGCTAATGTTTTCTACTATAAGATGAAAGGTGATTACTATCGGTATCTTGCTGAGTTCAAGACTGACCAAGAAAGGAAAGAGGCAGCTGAGCAGTCACTGAAAGGATATGAGgctGCTTCAGCCACTGCAAACACAGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCACTCAATTTCTCTGTCTTTTATTATGAGATAATGAACTCTCCTGAAAGGGCCTGTCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCGGAGTTGGACACCCTGAGTGAAGAGTCATATAAGGACAGCACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACCTCCGATTTGCCTGAGGATGGAGGTGAGGACAGCATAAAAGCTGAAGAAGCCAAACCTACTGAGCCTGAGCATTGA 585 0.4308 MSSIEQKEESKGNEQNVKLIKSYCQKVEEELSKICGDILTIIDKHLIPSSTSAEANVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGEDSIKAEEAKPTEPEH 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1506 194 PANTHER 14-3-3 PROTEIN 1 189 IPR000308 -
Ssu2g1506 194 ProSitePatterns 14-3-3 proteins signature 2. 152 171 IPR023409 -
Ssu2g1506 194 SUPERFAMILY 14-3-3 protein 1 177 IPR036815 -
Ssu2g1506 194 MobiDBLite consensus disorder prediction 172 194 - -
Ssu2g1506 194 PRINTS 14-3-3 protein zeta signature 89 115 IPR000308 -
Ssu2g1506 194 PRINTS 14-3-3 protein zeta signature 54 76 IPR000308 -
Ssu2g1506 194 PRINTS 14-3-3 protein zeta signature 23 47 IPR000308 -
Ssu2g1506 194 PRINTS 14-3-3 protein zeta signature 116 142 IPR000308 -
Ssu2g1506 194 PRINTS 14-3-3 protein zeta signature 143 172 IPR000308 -
Ssu2g1506 194 Gene3D - 1 183 IPR036815 -
Ssu2g1506 194 Coils Coil 130 150 - -
Ssu2g1506 194 SMART 1433_4 1 184 IPR023410 -
Ssu2g1506 194 Pfam 14-3-3 protein 2 170 IPR023410 -
Ssu2g1506 194 MobiDBLite consensus disorder prediction 176 194 - -
Ssu2g1506 194 PANTHER BNAC03G57490D PROTEIN 1 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1506 Ssu-Chr2 61964773 61966557 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1506 2 61964773 61966557 Ssu2g1506 2 61964773 61966557 ECH
Ssu5g1370 5 44617874 44621709 Ssu2g1506 2 61964773 61966557 PCT