Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1505 ATGATGCTCTCCCTGATGACTGAATCTTATGACTTAGTCATTGGAATGCTCTTTTCCGTGGACCAGATCGATACTGCATTCAAATATATAGATTTAACTTTGAAATCTGGTAATGTGTTGTCAATGAAGGTATTTATGAACTGTGTGTGGAGTTGTGTCAAAAAGGGAAGGCTTGATACATTGGTGACAATAATTGAAAAGTGCAGGACAACAGATCAAAACAAAGCTCTTTGCCCCAACTGGGACTTGTGCaattttattgttgaaattGCAACTCGAGAGGATAATAGCAAGTTAGCTTTTTATGGCCTGGAGTTTATGGCTAGATGGATTGTAAAGGGGGAACGTCAAAGACCCCCTATATTTCTTTCTGTAGATGAAGGTTTAGTTCTGTCAGCTCTTTTGACTGCTGGTAGAACCTATAATTCTGATCTGCTAGGGGCATCATGGGCTGTTTTGGACCGTTCATTGCGTAAAAAGAAAGCTCCTAATCCAGAGTCATATCTTGGAAAGATTTATGCCCTTGCATCATTGGGGAATCTACAGAAGGCTTTTGGTACTCTGAATGAATATGAGTCGGCTTTTGGAGATTCTGGTCAAGAAGCTGAAGACTTGTTCTGCCCATTTACTTCGTTACATCCATTGGTTGTGGCATGCTCCAAGAAGGGTTTTGAGACTCTAGATAATGTTTATTTTCAAATGGAGAATTTAAACCGTGAAGAGCGTCCTTATAAATCTGTTGCTGCACTAAACTGCATCATTTTAGGATGTGCAAACATATGGGATCTTGATCGAGCTTACCAAACTTTTGAATCAATTGGATCTACTTTTGGGTTGAACCCTGATATTCATTCATACAATGGGCTGATGTGTGCCTTTGGGAAGCATAAGAAGACACATGAAGCTTCAAGGGTGTTTGAGCACCTAGTGAGTTTGGGTCTCAAGCCTAATGCAAAATCATATTCTCTGCTTGTTGATGCCCACCTGATTAACCGGGATGTCAAATCTGCTCTGGCAGTGATTGATGATATGAGAGCTGCTGGATTTGAACCAGTCGAAAGAGATGCTAAAAAAGGTCAGACGGCGATGCATGCGAGAAATGGACTATGA 1110 0.4045 MMLSLMTESYDLVIGMLFSVDQIDTAFKYIDLTLKSGNVLSMKVFMNCVWSCVKKGRLDTLVTIIEKCRTTDQNKALCPNWDLCNFIVEIATREDNSKLAFYGLEFMARWIVKGERQRPPIFLSVDEGLVLSALLTAGRTYNSDLLGASWAVLDRSLRKKKAPNPESYLGKIYALASLGNLQKAFGTLNEYESAFGDSGQEAEDLFCPFTSLHPLVVACSKKGFETLDNVYFQMENLNREERPYKSVAALNCIILGCANIWDLDRAYQTFESIGSTFGLNPDIHSYNGLMCAFGKHKKTHEASRVFEHLVSLGLKPNAKSYSLLVDAHLINRDVKSALAVIDDMRAAGFEPVERDAKKGQTAMHARNGL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1505 369 Pfam PPR repeat family 281 327 IPR002885 -
Ssu2g1505 369 TIGRFAM PPR: pentatricopeptide repeat domain 284 318 IPR002885 -
Ssu2g1505 369 TIGRFAM PPR: pentatricopeptide repeat domain 320 351 IPR002885 -
Ssu2g1505 369 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 317 351 IPR002885 -
Ssu2g1505 369 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 282 316 IPR002885 -
Ssu2g1505 369 Gene3D Tetratricopeptide repeat domain 152 368 IPR011990 GO:0005515
Ssu2g1505 369 PANTHER OS07G0599000 PROTEIN 8 358 IPR044605 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1505 2 61953224 61956605 Ssu2g1505 2 61953224 61956605 ECH