Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1361 ATGTTCAACCTTTCACAAAATTTCATTTCTGCCACAGTCCAAGTACTCTCCTCTAAACACCTTGAAAAAACACCTTCCCAGCTCTCCCCTATATATAGTCCTTCTGCAGAGCGGGAAAAAGCAGCGCGGCGAAGTGACAAGCAGCGAAAACCACAAACGTCGCCGTTCCATCGAGCTCTAGGGTTTATGGTTTCGCTCATGGCGAACGTCGTGGATCAAGATCAGCAATGGCTTCTCAATTGCTTGTCTGCCACACTCGACCCCAACCCGCAGGTTCGCTGTTTCGCCGAAGCTTCCCTCGATCAAGCCTCTCGCCAACCAGGTTTTGGCAGTGCGTTATCAAAAGTTGCTGCAAACAAGGAGCTTGCAGTGGGACTGCGTCAGTTAGCCGCAGTCCTTCTTAAGCAGTTAGTTAAAAAGCATTGGCAGGAGGGTGAGGACTCTTTTGAACCTCCTGTTGTTTCTAACGATGAAAAGGAAATCATCCGCAGAATGCTTCTATTGGCATTGGATGATCCTCATAGGAAAATTTGCACGGCTATTGGTATGGCTGTGGCATCCATTGCTGTGCATGACTGGCCAGTGTTATGGCCAGATTTGTTACCATTTCTCCTGAATTTGATTAACAATCAAACCAACTTGAATGGAGtGCATGGAGCTATGAGATGCTTGGTTCTTCTCTCTGCGGACTTGGATGATAAAATGGTTCCAACATTAATACCTGCTTTGTTCCCGAGTTTGCTGACAATTGTATCCTCTCCCCAGATATATGACCCATACATTCGAACGAAGGCCCTTTCGATAATCTATTCTTGCACTTCTATGCTAGGAACAATGAGTGGTGTCTATGAGGCAGAAACGAGTTCTCTGATAGTTCCTTTTCTTAAACCATGGATGGAccaattttcttctattctaGAAATTCCAATTCAATCTGCTAATCCGGATGATTGGAGCATGAGAATGGAGGTTTTGAAGTGCTTGAATCAGTTTATTCAGAATTTTTTGAGTCTCATTAAAAGTGAAGTTGAGGTTATATTGGGACCTTTGTGGAATACATTTGTCTCTTCTTTGAGAGTTTATGAGCAAGCATCTATTGAAGGAACAGAAGATTCATATGAGGGAAGATATGATTCTGATGGTTCAGAGAAAAGCCTTGAGTCATTTGTTACCCAGCTGTTCGAACTCATGTTGACCATTGTGGGTAATCCAAGACTGGGAAAGGTGGTTGCGGCTAATGTCAAAGAATTGGTGTACTATACTATAGCTTTTCTTCAAATGACAGAACAGCAGGTTCATACGTGGTCTATGGATGCTAACCAGTTCATTGCTGATGAAGATGATGCCACTTATAGCTGCCGCATGTCTGGCATGCTTTTACTGGAAGAGGTAGTAAATTCTTTTGATGGTGAAGGAATTTTGGCCATCATAGATGCTGCAAAACAATGGTTCACCGAGTCTCAAATCAGAAAAGCAGCCGGCAATGCCAGCTGGTGGAGGATAAGGGAAGCTACTCTTTTTGCCTTATCATCTCTTTCAGAACAACTGTCTGAGACAGAGGAGTCTGGGTATGAGACAAGTAGCTTGAAGCACCTGGTTGAGCAGATTTTCACTGAAGAATCTCTACTAGGTCCTCTTGAATACCCCTTTTTATATGCTCGTGTTTTCACTTCGGTTGCTAAATTCTCCTCTTTGATAAGCAGTGGTTTACTAGAGCATTTTCTATATTCAGCAATGAAGGCACTTACAATGGATGTGCCCCCACCTGTAAAAGTAGGTGCCTGCAGAGCACTTTCTAACCACCTTCCTGaagcaaaaaatgaaattgtccAATCGCAATTGTTGGGTTTATTTTCATCCCTCACAGATCTTCTTAATCATGCATCCGATGAAACCTTGCACATGGTACTTGATACATTGCTTGCTGCAGTAAAAGCAGGTCATGAATCATCGACATTAGTAGAAAACATGATTTCTCCTGCAATCCTTAATCTGTGGGCATCACATGTTTCGGATCCTTTTATCAGTATTGATGCACTTGAAGTTCTTGAGgCTATCAAAAGCATTCCCGGATGTATACATCCATTGGTTTCCAGAATTTTGCCATATGTTGGACCAATTTTAAATCAACCCCAAGAGCAGGCTGATGGTTTGGTAGCTGGATCACTAGATCTGGTAACAATGCTACTGAAGAATGCCCCTGCTGATGTAGTGAAAGCAATATATGATGTCTCTTTTAATGCTGTTATCAAAATAATCCTTCAAAGTGATGACCACAGTGAAATTCAGAATGCTACAGAATGTTTATCTGCTTTTATATCTGGGGGAAGACAAGAAATTCTTGCGTGGGGATCTGATTCTGGATCAACTATGAGAAGTTTACTTGATATAGCTTCAAGACTACTAGACCCCAGATTGGAAAGCTCTGGGTCTTTCTTTGTTGGGAGTTACATTCTTCAACTTATTTTGCATTTACCATCACAGATGGCGGTACATATACGAGACCTGGTTGTTGCTCTTGTCAGACGTATGCAATCTGCCCAAATTGATGCCTTGAAAAGCTCATTGCTAGTTGTTTTTGCCAGACTGGTACACATGAGTGTTCCTAATGTTGGACACTTTATTGATTTGCTGATCTCAATTCCTGCTGAAGGACATGATAATTCCTTCGCTTATGTAATGTTAGAATGGACTAAGCAGCAAGGAGAGATACAGGGGGCTTATCAAATAAAAGTCACTACAAGTTCCCTGGCCTTGTTGCTAACCAGTAGGCACAGTGAACTGGCAAAAACACATGTCCAGGGCCATCTGATTAAGTCTGGCACGGGAATAACCACAAGATCAAAAGCTAAATCAGCTCCAGATCAATGGGTGATGTTGCCACTTCCTACAAAgATAGTTGCTTTGTTGGCAGATGTGTTAACTGAAATACAAGAACAAGTTTTGGCCGCCGATTATGAGGATAGTGACTGGGAAGAAGTTCAAGCAGATGgcattgaaaatgataaagaattACTTTATTCAGTGTCTACATCTTCTGGAAAAGCCGCGTATGAACATCTTGAAGCAATGGCAAAAGTATTTAATGAGGATCAAGATGATCAGTATGAAGATGACCTTTTAAGTGTTGCCGATCCTCTTAATCAGATAAATCTGGCAAATTACCTAGTTGATTTCTTCGTTAGCTTTTTTCAGTCTGACAGACAGCTCTTAGATCACATTTGCGAGAGCTTGACTCAGTCTCAACGAAATGCCATTCAAATGGTACTGAAGAGATGA 3279 0.4129 MFNLSQNFISATVQVLSSKHLEKTPSQLSPIYSPSAEREKAARRSDKQRKPQTSPFHRALGFMVSLMANVVDQDQQWLLNCLSATLDPNPQVRCFAEASLDQASRQPGFGSALSKVAANKELAVGLRQLAAVLLKQLVKKHWQEGEDSFEPPVVSNDEKEIIRRMLLLALDDPHRKICTAIGMAVASIAVHDWPVLWPDLLPFLLNLINNQTNLNGVHGAMRCLVLLSADLDDKMVPTLIPALFPSLLTIVSSPQIYDPYIRTKALSIIYSCTSMLGTMSGVYEAETSSLIVPFLKPWMDQFSSILEIPIQSANPDDWSMRMEVLKCLNQFIQNFLSLIKSEVEVILGPLWNTFVSSLRVYEQASIEGTEDSYEGRYDSDGSEKSLESFVTQLFELMLTIVGNPRLGKVVAANVKELVYYTIAFLQMTEQQVHTWSMDANQFIADEDDATYSCRMSGMLLLEEVVNSFDGEGILAIIDAAKQWFTESQIRKAAGNASWWRIREATLFALSSLSEQLSETEESGYETSSLKHLVEQIFTEESLLGPLEYPFLYARVFTSVAKFSSLISSGLLEHFLYSAMKALTMDVPPPVKVGACRALSNHLPEAKNEIVQSQLLGLFSSLTDLLNHASDETLHMVLDTLLAAVKAGHESSTLVENMISPAILNLWASHVSDPFISIDALEVLEAIKSIPGCIHPLVSRILPYVGPILNQPQEQADGLVAGSLDLVTMLLKNAPADVVKAIYDVSFNAVIKIILQSDDHSEIQNATECLSAFISGGRQEILAWGSDSGSTMRSLLDIASRLLDPRLESSGSFFVGSYILQLILHLPSQMAVHIRDLVVALVRRMQSAQIDALKSSLLVVFARLVHMSVPNVGHFIDLLISIPAEGHDNSFAYVMLEWTKQQGEIQGAYQIKVTTSSLALLLTSRHSELAKTHVQGHLIKSGTGITTRSKAKSAPDQWVMLPLPTKIVALLADVLTEIQEQVLAADYEDSDWEEVQADGIENDKELLYSVSTSSGKAAYEHLEAMAKVFNEDQDDQYEDDLLSVADPLNQINLANYLVDFFVSFFQSDRQLLDHICESLTQSQRNAIQMVLKR 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1361 1092 Gene3D - 73 1087 IPR011989 -
Ssu2g1361 1092 MobiDBLite consensus disorder prediction 25 54 - -
Ssu2g1361 1092 PANTHER IMPORTIN-9 72 1091 - -
Ssu2g1361 1092 Pfam Importin-beta N-terminal domain 96 170 IPR001494 GO:0006886|GO:0031267
Ssu2g1361 1092 SMART IBN_N_2 96 172 IPR001494 GO:0006886|GO:0031267
Ssu2g1361 1092 MobiDBLite consensus disorder prediction 37 53 - -
Ssu2g1361 1092 ProSiteProfiles Importin-beta N-terminal domain profile. 96 172 IPR001494 GO:0006886|GO:0031267
Ssu2g1361 1092 PANTHER IMPORTIN-7, 8, 11 72 1091 - -
Ssu2g1361 1092 SUPERFAMILY ARM repeat 74 1090 IPR016024 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1361 2 57447988 57490292 Ssu2g1361 2 57447988 57490292 ECH