Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1349 ATGCACAACGCATATGTTAGCTCAACAATATATGCTGTTAGATGTAAAGAATCATTCTCATTATCTTTCAATGGCTACTCAAACTTCTGTTATGAAAGATTTGACAGAACCCCATCATACTGTTTGTCATGCTGTGGTTGTTGTGATTGCTGTTCAGTCTCCACTTACAGAGTACCAGTAAAGCCTTGTCTTATAAATGGGTTGAGGCAATCCGCTCTTTTTCAATTGTCAGCATCTAGAAGGTTGATATTGGGTGGTGGAGACCATTACTTTTCCCGGCTACCAGCTTATGGTTTCCTCAGAGGTTGTCATGAGCTTAATTCTTCTGTCAATGAGAGAACTGTTTGCAATAATAGTAGACGGAGAATAAAGGGAACATGTATTCGGGCTGCCTCACAAAAGGGGAGAGAATTTTCCCATTCATCTGGTTCTGATGATGCTGAAGCAGTTCTCAGCTTGTTGAGTGAGGAGGCGGATAAGGATGTTATTTGTAGCAAATGTAAGAATGTTTCTTCATCCAAAAGCATGGAAGttgagaataaaagaaaaaatgtgagCAGAGAGAGACATTTGAATTTGAGTGAGAAAGTAGAAAcagagaaaaaaggaaatttgaagCGACATGAATTATCCACCATAGACTTGAGAAGAGAGTATGAAAAACCCAACAAAGAAAGGGAAGCCTTTGCAAAAAGTGAAAACCATAGGAAACGAAGAGATGTGTCTAGTTGTTCATCTTATTACTCTCTCTCATCAGGAGATTTTGGGAGTGAGCTGGAAGTTCAGGAAGAGATTGGTTTGGAAGAGTCGTCACTGGAATATGAGAAGGACGAAGCAAATCGGGTGGAGGAACAAGTGAAGGAAGAATTCAACAGGCAAGGGGATGACTCAAAGAAGCTGCAGAATGTTTCAAATAAGGAAAGAATTGCATTTGGTGTGGATATTGATTGGAACCTAAGGAAGAAGTCTGAAAAGAAGCTGACTGAGGGAACTCTGCAAAATACAGAATCCACAAGAGAACAACAGGATATGCATTCAAGAGAATTTAGAAAACATGAATCTGGTCATAAAAAATCATCTATTTCACAGAAGCGAGTCAATAGTGAGGAAGATAAATCATCTTTTGTTGACAATTTGgacaagaaaacaaacaacgCTTATATTCAAACAGTAAACAGAAGAAAGCATCAATCTATAGATGTACAAGAGTCAACTTTGTTATCACAAAAGGAATTCAGTGGCGGGGAAGGGAAGCTTGAGATATCAGAAACACTGTTAAAGGAAACAAATgatgaacataaaaaatttgttggttCAACTTCTACCACAGGAAAGGAAACTTTGAAATCGAAGAAGGCATTCAGTGGCACGGAAGGGAACCTCACGATATCTGGAACACTTTTACAAGAAACAaatgatcaacaaaaaaaatttgttggttCTACTTCTACCTCTGGAAAGGACGTGATAGATAGAAGTTCCCAGAAATatactgaaaatttaaaaattgaagacaCTGAAAGGACCTCGAATACTAGGATGAAGGACATGGGAGTGAAAAAAGTTTCAGTTTTGAGTTCTGTTCAGGGAGTGGATGAGCGGCAACACCAAAAAGGAGAGAAGATCATTACTCAGGCTAAGgataaagagagaagaaaacaatcTGAACGATTTTCTGAAGTATCAGAAGCTCACGAGATTAATGTTGATGATGCATCTATCATAAAGTCTAGAACTAGATTAAAGAACTTGGAAGAAAAATCGAACTTAAGCTCAGGTGCGAGGGGTACATGGCTCCTAACAGATAAAAGGACAAGTCAGAGTTTCCAACATGGGAAAGGATCTGAACTTGTCAGCACTTTATCAGAAGGCTATGCCAGTGATGAAAAACAAGTTTCAAGTTCTCAAAACACTTATGAGAAGGTGAGATTCATTCCAAAAAGTAAATCAACATCAGTTGTTAGAACTAGAGAAAGTTCTAGCCAAACTGATGAAAGGATTGCAAATTTTGAATTGGCCAGAGAGGACCAAAGATCTAGCAACCTTTCAATTTCTGATGAAACTACCTCAAGAGAGGAATCCAGCTCCCAGGGATCACTGAATTTGGTTTCTGGGGCTGGAAAATTAGTAGCAGGTGAAGAAAGGAGCTCTGCAACAATGTTGATCCCTTCCACTTCCCAAATGGGTAGAGGCTCAGCACAGGTCGAACTCACTGCAGGAATCACAAGCCCTAAGATCTTCCTTGAAACTTCAGAAATTGGCTCTTCTGCTTTGTATGACAATTCAGGAAGAAGTTCTGCTTTGCTTCCACATGCACTTGGTTCAGCTGATCGTTTAGAGAAATCATCTAGACAGTTTGTTGATGAGTTCGTTGAGAAGGTCAGGCATGAAGTAACAACTTCAGAAGCACAAGAGATGGAAGTTACAGGAACAAAGTTGACACTCGAAGTTGGTGGTAATCAGATCTACAGCTCAAGGCAACAAGGCACTCAAATTGACACTCAGTCAAAGGAGCATGGTTCTAGTCATTCCTCTGGGTTTCCTGGGACCAAAGGACCTTCTGATGAGATGTGGGATGTCACAGAACCATCTGTTGAGCAAGGTCTAGTAGCCAAAGAAACAGAGATCAACAGGGAAACTGGGAAAACAATTGTTACTAGAACTGGGAGGTCCTTATGGGGTATGATTGCTGATCTTGTTCGATTACGTTGGGTTTCGCGTGCTGGTTCCTCCACTTCAGCTGGAAAATCAGCTGAGAGAAACTCATCAAACAAGTCTGATAGTGACACATGGTTTTCTGGGCAGGAGCATGAGGAAACCAGTAAAACTAGTGTAATAAAGGAAACAAGTGTACTACCACAGGCCATGACTTCTGATAAATTAAAGCCAGGTAAACATTATCCCCAAAGTGAGGGAGAGGTGTCTGACAATACAAAATTGAGGGACAAAGGAAAGCATCTTGAAGTTGGATTGTCATCACCCAATACATTGGAGAGTGGATCAACATCAGTAGGTGCCTCATATCCTTCTGGAGAAGAAAATGCTAGTTGGGTcgaagataaaaaagatttgaaagATGCTACTGGCACACAAAACATGGAATTACCAATTTCAGCACCTGCCAGAGAGCCTCCTATTGTTGGAGAAATTGTAAACATTGGTGGATCTGACATGTTTGGAACTGAGTCAGCGGTGCCAATCAAGGCACCTGTTGCTCCAGTGCAGTCTGAATTGTCTGGCTCTGAGAGAAAGGATGGAGAGTTGAAGCAAAGAAAGCTTCAACGGAACAGGCAAGTCTTAAGAGATAGGTTTGACAACTGGGAAGAAGCCTATAAACGGGAATTTGAGCAGCGACGAATAGATGAAATGTTCATGAAGGAAGCACTTTTGGAAGCCAAGAAGGCTGCCGATACATGGGAGGTCCCCGTTGGTGCTGTTCTCGTGCAGCATGGGAAAATTATTGCTCGAGGGTGCAACTTAGTAGAAGAGCTACGGGACTCCACTGCCCATGCAGAGATGATTTGTATACGAGAAGCTTCAAACATTCTTCGGACATGGAGACTATCAGACACTACACTTTATGTAACACTTGAGCCATGTCCAATGTGTGCTGGTGCAATCCTTCAGGCAAGAATAGACACTCTTGTGTGGGGTGCTCCCAATAAGCTTCTTGGAGCTGATGGTAGCTGGATTAGGCTTTTCCCTGATGGAGGAGAAAATGTATCAGAACCAAGCGAGATGCCACCTGCCCCAGTTCATCCATTCCATCCAAAGATGAAAATAAGAAGAGGGGTCTTAGCCACAGAGAGTGCAGATGCAATGCAGCAATTCTTTCagctaagaaggaaaaagaagaaagaggaaacaCCAAAAGAACCTTCTTGCCTTCCTGTTACTCACCACCACCCCTCCAAGTTTCTTAACAAGATGCATGACATCTTCCACATAATGTTCTGTTTGTAA 3963 0.3969 MHNAYVSSTIYAVRCKESFSLSFNGYSNFCYERFDRTPSYCLSCCGCCDCCSVSTYRVPVKPCLINGLRQSALFQLSASRRLILGGGDHYFSRLPAYGFLRGCHELNSSVNERTVCNNSRRRIKGTCIRAASQKGREFSHSSGSDDAEAVLSLLSEEADKDVICSKCKNVSSSKSMEVENKRKNVSRERHLNLSEKVETEKKGNLKRHELSTIDLRREYEKPNKEREAFAKSENHRKRRDVSSCSSYYSLSSGDFGSELEVQEEIGLEESSLEYEKDEANRVEEQVKEEFNRQGDDSKKLQNVSNKERIAFGVDIDWNLRKKSEKKLTEGTLQNTESTREQQDMHSREFRKHESGHKKSSISQKRVNSEEDKSSFVDNLDKKTNNAYIQTVNRRKHQSIDVQESTLLSQKEFSGGEGKLEISETLLKETNDEHKKFVGSTSTTGKETLKSKKAFSGTEGNLTISGTLLQETNDQQKKFVGSTSTSGKDVIDRSSQKYTENLKIEDTERTSNTRMKDMGVKKVSVLSSVQGVDERQHQKGEKIITQAKDKERRKQSERFSEVSEAHEINVDDASIIKSRTRLKNLEEKSNLSSGARGTWLLTDKRTSQSFQHGKGSELVSTLSEGYASDEKQVSSSQNTYEKVRFIPKSKSTSVVRTRESSSQTDERIANFELAREDQRSSNLSISDETTSREESSSQGSLNLVSGAGKLVAGEERSSATMLIPSTSQMGRGSAQVELTAGITSPKIFLETSEIGSSALYDNSGRSSALLPHALGSADRLEKSSRQFVDEFVEKVRHEVTTSEAQEMEVTGTKLTLEVGGNQIYSSRQQGTQIDTQSKEHGSSHSSGFPGTKGPSDEMWDVTEPSVEQGLVAKETEINRETGKTIVTRTGRSLWGMIADLVRLRWVSRAGSSTSAGKSAERNSSNKSDSDTWFSGQEHEETSKTSVIKETSVLPQAMTSDKLKPGKHYPQSEGEVSDNTKLRDKGKHLEVGLSSPNTLESGSTSVGASYPSGEENASWVEDKKDLKDATGTQNMELPISAPAREPPIVGEIVNIGGSDMFGTESAVPIKAPVAPVQSELSGSERKDGELKQRKLQRNRQVLRDRFDNWEEAYKREFEQRRIDEMFMKEALLEAKKAADTWEVPVGAVLVQHGKIIARGCNLVEELRDSTAHAEMICIREASNILRTWRLSDTTLYVTLEPCPMCAGAILQARIDTLVWGAPNKLLGADGSWIRLFPDGGENVSEPSEMPPAPVHPFHPKMKIRRGVLATESADAMQQFFQLRRKKKKEETPKEPSCLPVTHHHPSKFLNKMHDIFHIMFCL 1320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 992 1010 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 909 1019 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 653 702 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 340 375 - -
Ssu2g1349 1320 CDD nucleoside_deaminase 1125 1232 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 826 849 - -
Ssu2g1349 1320 Coils Coil 1090 1110 - -
Ssu2g1349 1320 Pfam MafB19-like deaminase 1122 1221 IPR028883 GO:0002100|GO:0008251
Ssu2g1349 1320 Coils Coil 272 292 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 826 859 - -
Ssu2g1349 1320 ProSiteProfiles Cytidine and deoxycytidylate deaminases domain profile. 1119 1241 IPR002125 -
Ssu2g1349 1320 PANTHER CYTOSINE DEAMINASE FAMILY MEMBER 868 1310 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 326 375 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 659 673 - -
Ssu2g1349 1320 PANTHER TRNA(ADENINE(34)) DEAMINASE, CHLOROPLASTIC 868 1310 - -
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 674 702 - -
Ssu2g1349 1320 Hamap tRNA-specific adenosine deaminase [tadA]. 1125 1282 IPR028883 GO:0002100|GO:0008251
Ssu2g1349 1320 SUPERFAMILY Cytidine deaminase-like 1117 1286 IPR016193 GO:0003824
Ssu2g1349 1320 MobiDBLite consensus disorder prediction 909 930 - -
Ssu2g1349 1320 Gene3D Cytidine Deaminase, domain 2 1109 1294 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1349 Ssu-Chr2 57024664 57031874 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1349 2 57024664 57031874 Ssu2g1349 2 57024664 57031874 ECH