Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1345 ATGGTGAAGTTCTCAAAGCAGTTTGAGGGGCAACTCATTCCAGAATGGAAAGAGGCCTTTGTGGATTACTGGCAACTCAAGAAGGACCTCAAAAAAGTCCATCTCTTTAATAATACCAACAATACACCCAACAAGCACCAAAGTAGTAGTAGTTCTCTACCTAAGTACATCTTTTCATCAATAAGAAACTACTCTCTATTTGGCCACCAACATAGAGAGCATGGACCAATTCAaGTCCATAGGAAACTTGCTTCATCATCTTTTAATGGGGACCTGTATGAGACAGAAATGCTAGAGCAATTTTCTGACACTGACGCTACTAAAGAATTTTTTGCATGTCTGGACCAGCAACTAAACAAGGTCAACAAGTTCTATAGAACCAAGGAGAAAGAGTTCATGGATAGAGGGGATTCCTTGAAAAAACAAATGGACATTCTCCTTATGCTCAAATCCACATTCAAGGAGCAGCAGGGCAAAGCAGGCTCTTCTCATGGCTCCAAGGAGGATCAATCTATCTCGTGCACATTCTCTAATGAGGAGGACTCTGTTCGGAGCAGAACACAGCAAGAAGAAATGCAGGACACTACTAGCACAGAGGATTTGGAGAAAAATGAAGCACCATTTTCAGATTCCCCTCGTGCAGATGAACTTGCCAAGTCTACGCAGATGAAAAGGGAAAATGGTAAAGAGAGAACACTTTCTGGCCGTGTCATCAATTGCCAAGGGAAGAATCTGAGGATAAACATTCCTTTGACAACGCCATCTCGAACCTTCTCAGCCATAAGCTACCTTCTCAGGGAAGATTTGTTTAACCAGTCTTCAAGGAAATGTGGTCCAGAAGGTGCCAACATTCACCTAAACAAAACCAATATGCACCGTGCTGAAAAGATGATCAAAGGAGGTTTCATTGAACTCTACAAAGGACTAGGCTATCTCAAAGTTTACAGGAACTTGAACATGCTTGCATTTATAAAGATTCTGAAGAAGTTTGATAAGGTCACTGCTAAACAAATTCTTCCCATCTATCTCAAAGTGGTTGAGAGTTCCTATTTCAATAGCTCAGACAAGGTGATGAAGTTAGCCGACGAAGTTGAGGAACTGTTCATCAAAAATTTTGCCGAGGATAATCGAAGAAAGGCCATGAAGTACCTTAGACCAAGCCAACGCAAAGAATCACATGCTGTAACTTTCTTCATTGGACTATTTACTGGTTGCTTCTTGGCTCTTGTTGCGGGATATGCTATAATGGCTCATGTGACTGGTTTGTACAGACCACATCAAAATTCAGTGTACATGGAAACTACCTACCCTGTACTTAGCATGTTCAGCCTTGTGTTCCTACACTTCTTTCTTTATGGTTGTAACATTCTTGCGTGGAGAAAAACTCGTATAAACTACAGCTTCATTTTTGAGCTGGCCCCTACCAAGGAACTCAAGTATAGagatatattcttaatttgcaCAATGGCAATGAGTGCTGTGGTTGGAGTAATGTTTCTTCATTTGACTCTACTGACAAAAGGGTATTCTTTTGCCCAAGTTCAAGACATTCCCGGACTTCTTCTTctgGGCTTCTTACTAATACTAATATGCCCCTTCAACATTATATACCGGTCAAGCCGTTACCGTTTCCTTTGTGTGATAAGGAACATAAGTTTGTCGCCCCTTTACAAGGTTGTCATGCTGGATTTTTTCATGGCTGATCAACTTTGTAGTCAGGTGCCAATGCTCAGGAGCCTTGAGTACGTGGCATGTTACTATATAACTGGTAGCTACAAAACTCAGGACTATGGATATTGCATGAGGACAAAGCACTATAGAGATCTAGCTTATGCAGTGTCATTTCTACCCTATTATTGGAGGGCTATGCAGTGTGCTAGGAGATGGTTTGATGAAGGGCAGACAAGCCACCTTGTGAATCTAGGCAAATATGTATCCGCAATGTTAGCAGCAGGTGCCAAAGTGGCTTATGAAAAAGATGGGAGTGTAGGATGGCTTTGTCTTCTTGTGATCATGTCAAGTGCAGCAACTGTATACCAATTGTACTGGGACTTTGTAAAAGATTGGGGTTTGCTTCAAATGAATTCCAAGAATCCATGGCTAAGGAATGAATTAATGCTTCACAGAAAGGCCATTTACTACTTGTCAATGGGATTAAATCTTATTCTGAGGCTAGCTTGGTTGCAAACTGTCCTTCATTCAAGTTTTGAAAACGTTGATTATCGAGTAACATGCTTATTTTTAGCATCTCTTGAAGTTATTAGACGAGGGCTATGGAATTTCTTCAGATTGGAGAATGAGCATCTCAATAATGCTGGCAAGTTTAGAGCAGTGGAGATAGTACCACTTCCTTTTCATGAAGTGGAAGAAGAAGACTAG 2379 0.4069 MVKFSKQFEGQLIPEWKEAFVDYWQLKKDLKKVHLFNNTNNTPNKHQSSSSSLPKYIFSSIRNYSLFGHQHREHGPIQVHRKLASSSFNGDLYETEMLEQFSDTDATKEFFACLDQQLNKVNKFYRTKEKEFMDRGDSLKKQMDILLMLKSTFKEQQGKAGSSHGSKEDQSISCTFSNEEDSVRSRTQQEEMQDTTSTEDLEKNEAPFSDSPRADELAKSTQMKRENGKERTLSGRVINCQGKNLRINIPLTTPSRTFSAISYLLREDLFNQSSRKCGPEGANIHLNKTNMHRAEKMIKGGFIELYKGLGYLKVYRNLNMLAFIKILKKFDKVTAKQILPIYLKVVESSYFNSSDKVMKLADEVEELFIKNFAEDNRRKAMKYLRPSQRKESHAVTFFIGLFTGCFLALVAGYAIMAHVTGLYRPHQNSVYMETTYPVLSMFSLVFLHFFLYGCNILAWRKTRINYSFIFELAPTKELKYRDIFLICTMAMSAVVGVMFLHLTLLTKGYSFAQVQDIPGLLLLGFLLILICPFNIIYRSSRYRFLCVIRNISLSPLYKVVMLDFFMADQLCSQVPMLRSLEYVACYYITGSYKTQDYGYCMRTKHYRDLAYAVSFLPYYWRAMQCARRWFDEGQTSHLVNLGKYVSAMLAAGAKVAYEKDGSVGWLCLLVIMSSAATVYQLYWDFVKDWGLLQMNSKNPWLRNELMLHRKAIYYLSMGLNLILRLAWLQTVLHSSFENVDYRVTCLFLASLEVIRRGLWNFFRLENEHLNNAGKFRAVEIVPLPFHEVEEED 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1345 792 PANTHER PHOSPHATE TRANSPORTER PHO1 HOMOLOG 1 2 792 - -
Ssu2g1345 792 PANTHER XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED 2 792 - -
Ssu2g1345 792 Pfam SPX domain 2 346 IPR004331 -
Ssu2g1345 792 CDD SPX_PHO1_like 3 340 IPR034092 -
Ssu2g1345 792 Pfam EXS family 437 769 IPR004342 GO:0016021
Ssu2g1345 792 ProSiteProfiles SPX domain profile. 2 344 IPR004331 -
Ssu2g1345 792 MobiDBLite consensus disorder prediction 156 182 - -
Ssu2g1345 792 MobiDBLite consensus disorder prediction 196 232 - -
Ssu2g1345 792 ProSiteProfiles EXS domain profile. 601 792 IPR004342 GO:0016021
Ssu2g1345 792 MobiDBLite consensus disorder prediction 156 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1345 Ssu-Chr2 56961188 56967080 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1345 2 56961188 56967080 Ssu2g1345 2 56961188 56967080 ECH