Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1341 ATGGAACACAACAACGGAGAGCCGACGCCGGTGCCGCGTGTGGCGGTGGTCGTTTTTCTCTTAAAGGGCAGATCGGTCCTCCTCGGACGCCGCCGCTCCTCCGTCGGCAACGCCACCTTCGCCCTTCCCGGCGGCCACCTCGAATTCGGGGAGAGTTTTGAGGAATGTGCGGCGAGAGAAGTGAAAGAGGAAACGGGGTTGGAGATAGGGAACGCGGAGTTTCTGACTGTAACGAACAACGTGATGTTGGAGCAGCCAAAAAAGTGCCACTACGTGACCATTTTCATGAGGACAATGATGGGTGTGGATGCAGCAAAAGAAGATCAGGAGCCCCAGAATCTTGAGCCTCAAAAGTGTGATGGTTGGGATTGGTATGAGTGGGATCATTTGCCACAACCTTTGTTTGGGCCTCTCGAGAAAATGGTCAAAGGAGGTTTCGACCCATTTCCTCTCTGA 456 0.5395 MEHNNGEPTPVPRVAVVVFLLKGRSVLLGRRRSSVGNATFALPGGHLEFGESFEECAAREVKEETGLEIGNAEFLTVTNNVMLEQPKKCHYVTIFMRTMMGVDAAKEDQEPQNLEPQKCDGWDWYEWDHLPQPLFGPLEKMVKGGFDPFPL 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1341 151 ProSitePatterns Nudix box signature. 45 66 IPR020084 GO:0016787
Ssu2g1341 151 PANTHER 8-OXO-DGTP DIPHOSPHATES NUDT15 2 150 - -
Ssu2g1341 151 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 5 150 - -
Ssu2g1341 151 SUPERFAMILY Nudix 7 140 IPR015797 -
Ssu2g1341 151 CDD Nudix_Hydrolase_19 12 140 - -
Ssu2g1341 151 PRINTS NUDIX hydrolase family signature 54 69 IPR020476 -
Ssu2g1341 151 PRINTS NUDIX hydrolase family signature 40 54 IPR020476 -
Ssu2g1341 151 Pfam NUDIX domain 13 134 IPR000086 -
Ssu2g1341 151 ProSiteProfiles Nudix hydrolase domain profile. 11 147 IPR000086 -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1341 2 56767082 56769035 Ssu2g1341 2 56767082 56769035 ECH