Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1336 ATGGAGTTTTCTTGCAAGGACTTCAAGGTGGGAAAATGTGAGGGAGAAAAAGTAGTAGATGGGGAAACCATGCCCTTGGTGCTACAACCTCCAGTGCCCAACAAGAGTGACTTGGAATCCTTGCTCTTGGCTCTCAAGAACAACACAGACTGGTTTGAGCAAATGATCATCAAGAACAGTGCTGTTCTCCTCAGAGGTTATGATGTCAAGAATGCTGAGGACTTCAATGAGATCATAGAAACCTTTGGGTGGGAAGACATTCGTTATGTTGGACCAGCACCTCGCACACATATTTACAAAAGGGTGTGGACTGCCAATGAAGGACCCCTCTCAGAGTTCATATACTATCACCATGAAATGGTTTTGATTAAGGAATATCCCAAGAAAGTGATTCTCTTTTGTGAGATACCTCCCCCAGAAGGGGGAGAGACACCTTTTGTTCCAAGCTTCAGAGTGACAGAAAGGATGCTGGAGGAGTTCCCAGAAGAGGTGAAGGAGATTGAGGAGAAGGGGTTGAAGTATTCATTTACTGCTCGTAGTACTCAGAATGATAACTCCTCCATGAGAGGCAGAGGGTGGGAGGATGCCTTTGGGACCACAGATCGCAAAGAAGCTGagaaaagGGCAAAAGCTCTAGGAATGGACATGGAGTGGCTTCCAAATGGTGGGGTGAAGACAATACTTGGACCAAGAAGTTTAACCAAGGTATTTGAaggaaggaaaggaagaagaatgTGGTTTAACACATTAGTAGGCATGTATGGGAAGGAGCTTAGCTCGGCCATGATGGCAGATGGAACAGAGATTCCAGAAAATGTAGTGAAAAGGTGTGAAGAGATCATTGAAGAAGAGAGCATTCAGTTCAAGTGGGAGAAAGGGGATGTTCTCTTCTTTGATAACTATGCTTTGCTTCATGGTAGGAGGCCTTCCCTTCCTCCAAGGAAAGTCCTTGTTGCTACATGCAAGTAA 969 0.4386 MEFSCKDFKVGKCEGEKVVDGETMPLVLQPPVPNKSDLESLLLALKNNTDWFEQMIIKNSAVLLRGYDVKNAEDFNEIIETFGWEDIRYVGPAPRTHIYKRVWTANEGPLSEFIYYHHEMVLIKEYPKKVILFCEIPPPEGGETPFVPSFRVTERMLEEFPEEVKEIEEKGLKYSFTARSTQNDNSSMRGRGWEDAFGTTDRKEAEKRAKALGMDMEWLPNGGVKTILGPRSLTKVFEGRKGRRMWFNTLVGMYGKELSSAMMADGTEIPENVVKRCEEIIEEESIQFKWEKGDVLFFDNYALLHGRRPSLPPRKVLVATCK 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1336 322 Gene3D - 5 322 IPR042098 -
Ssu2g1336 322 PANTHER OS08G0383800 PROTEIN 5 322 - -
Ssu2g1336 322 PANTHER GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED 5 322 - -
Ssu2g1336 322 Pfam Taurine catabolism dioxygenase TauD, TfdA family 36 317 IPR003819 GO:0016491
Ssu2g1336 322 SUPERFAMILY Clavaminate synthase-like 11 321 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Ssu2g1336 Ssu-Chr2 56607763 56610116 Dispersed
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1336 2 56607763 56610116 Ssu2g1336 2 56607763 56610116 ECH