Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1332 ATGATAGTCAGGTTAGGACTCATAGTTGCTGCTTCACTTGCAGCCTTTACAGTTAAGCAGCTGAATGTCAGAAGCTCAAAACCAGAACATAAAGATGAGGTCACAGAAGAGGAGCATGGTGATGCTCTCCAAAAGAAAGAAagggaggaggaagaggagaaaGAGGAGGTTAAGTTAATTAGCAGCATTATTAATCGGGCGAATGACTTTGAAGATGATATTCTACCAGAATTTGAAGATCTTCTGTCTGGGGAGATTGAGTTTCCATTACCACCTGACAAGGCTGAGAAAGACAAAGTTTATGAAATTGAGATGGCAAACAATGCAAATGAACTAGAAAGATTGCGACGGCTAGTGAATGAATTGGAGGAGCGAGAAGTGAAACTGGAAGGAGAATTGCTTGAGTACTATGGTTTGAAGGAGCAAGAATCAGACATTGTGGAGTTACAAAGGCAGCTGAAAATTAAGACTGTGGAAATAGATATACTTAATATTACTATCAATTCCTTGCAGGCAGAAAGGAAGAAGCTTCAAGAAGAGCTCACACAAGGAGCTTCAGCCAAGAGAGAACTTGAGGTGGCTAGAAACAAGATCAAGGAGCTGCAAAGGCAGATACAGCTTGAGGCTAACCAAACAAAAGGCCAGTTGTTGTTGCTTAAACAACAAGTTTCTGGTCTACAGGTGAAAGAAGAAGAGGCTGCCAGAAAAGATGCTgaagttgaaaagaaattgaaagctGTGAATGATTTAGAGGTTGCAGTAGTGGAGCTTAAGAGACAAAACAAAGAACTTCAACATGAGAAGCGAGAACTAATGGTTAAACTCAATGCGTCTGAATCTAAAGCAGCTGAGCTCTCCAATATGACAGAGAGTGAAATGGTTGCCAAGGCAAAAGAAGAGGTCAGTAACCTGAGGCATGCAAACGAAGACCTGCTAAAGCAAGTGGAAGGGCTACAGATGAATAGGTTCAGTGAAGTTGAAGAGCTTGTATACCTTCGTTGGGTTAATGCATGCTTGAGGTATGAGCTAAGGAATTACCAGGCACCCCAAGGAAAAGTATCAGCCCGTGATCTCAGCAAGAGTCTTAGCCCTAAATCACAAGAGAAGGCTAAGCAACTGATGTTAGAGTATGCTGGATCAGAACGCGGACAAGGGGACACAGACCTTGATAGCAACTTCTCTCATCCTTCTTCACCAGGAAGTGAAGATTTTGACAATGCTTCCATTGATAGCTCTACTAGCAAATATAGTAGTCTTAGCAAGAAAACTAGCCTGATCCAAAAGTTTAAGAAATGGGGTAAAAGCAAAGATGATTCTAGTGCTCTTTCATCACCAGCTAGATCCTTTTCAGGAGGTTCTCCAAGGCGGATGAGTATGAGTGTTAAACCTAGGGGTCCACTAGAAACCTTAATGCTAAGGAATGCTGGTGATAGTGTAGCCATCACCAGCTTTGGGCTAAGGGATCAGGAACCTACTGATTCTCCTGAAACTCCAACTGCTACTGACATGAGAAGAGTTCCATCCAGTGACTCCTTAAATTCTGTTGTTGCTTCATTCCAATTGATGTCCAAGTCAGTTGATGGATCTATGGATGAGAAGTATCCTGCGTATAAAGATCGCCACAAGTTGGCCTTGGCaagggaaaaacaaattaaagaaaaggctGAGAAAGCAAGAGTGTTGAAGTTTGGTGACAATTCAGGTTTGAATATGACCAAGGCCGAAAGAGGGAGTCCCGTATCTTTGCCACCAAAGCTTACTCATATAAAGGAGAAATCAAATGTTTCTGGCACTCCAAATGATCAATCTGATGATGGCAAGAATGTTGATAATCAAACCATTAGCAAAATGAAGCTTGCTCACATTGAGAAAAGGCCTACTAGGGTGCCTAGGCCACCTCCTAAAGCATCTGGTGGTGGTGCTGCTGTTAGCACAAATGCAAATCCTTCCAATGGAGTACCATCTGCTCCACCaattcctcctcctcctccaggTGGACCACCTCCCCCACCTCCTCCCCCTAGAAGCCTATCAAGAGGAGCAATGGATGGTGACAAAGTTCACCGAGCTCCACAGCTTGTtgaattttatcaaacattgaTGAAAAGGGAGGCAAAGAAGGATACTTCATCACTTTTAGTTTCTTCAACAAGTAATGCATCTGATGCTAGGAGCAACATGATTGGGGAAATTGAGAATAGATCATCGTTCCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGTCCTTGGCAGCAGAAGTTCGAGCAGCCTCCTTCTCAGATATTAATGATCTGGTGGCCTTTGTGAACTGGCTAGATGAGGAACTTTCCTTCCTGGTTGATGAACGAGCCGTCCTCAAGCACTTTGATTGGCCTGAAGGGAAAGCAGATGCACTAAGGGAGGCAGCTTTTGAATATCAGGATTTGATGAAATTGGAAAACAAGGTCTCCACCTTCATTGATGATCCCAAACTCCCATGTGAAGCTGCTCTGAAGAAAATGTATTCATTGCTTGAGAAAGTGGAGCAAAGCGTGTATGCACTCTTGCGGACAAGAGATATGGCTGTTTCGCGGTACAGGGAATTTGGAATCCCAGTAAACTGGCTGTTGGATTCAGGAGTTGTAGGCAAGATCAAGCTTTCTTCTGTACAAGTGGCAAAGAAGTATATGAAACGTGTTGCATCTGAACTTGATGAATTATCTGGTCCTGAGAAAGAACCAGCTAGAGAGTTTTTGATTCTGCAAGGAGTGCGTTTCGCTTTCCGTGTCCATCAGTTTGCAGGAGGCTTTGATGCAGAGAGCATGAAGGCTTTTGAAGACCTAAGGAGCCGCATCCAAACCTCTCAAGCTGGAGAAGATAACAAACCAGAAACATAG 2892 0.4174 MIVRLGLIVAASLAAFTVKQLNVRSSKPEHKDEVTEEEHGDALQKKEREEEEEKEEVKLISSIINRANDFEDDILPEFEDLLSGEIEFPLPPDKAEKDKVYEIEMANNANELERLRRLVNELEEREVKLEGELLEYYGLKEQESDIVELQRQLKIKTVEIDILNITINSLQAERKKLQEELTQGASAKRELEVARNKIKELQRQIQLEANQTKGQLLLLKQQVSGLQVKEEEAARKDAEVEKKLKAVNDLEVAVVELKRQNKELQHEKRELMVKLNASESKAAELSNMTESEMVAKAKEEVSNLRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQAPQGKVSARDLSKSLSPKSQEKAKQLMLEYAGSERGQGDTDLDSNFSHPSSPGSEDFDNASIDSSTSKYSSLSKKTSLIQKFKKWGKSKDDSSALSSPARSFSGGSPRRMSMSVKPRGPLETLMLRNAGDSVAITSFGLRDQEPTDSPETPTATDMRRVPSSDSLNSVVASFQLMSKSVDGSMDEKYPAYKDRHKLALAREKQIKEKAEKARVLKFGDNSGLNMTKAERGSPVSLPPKLTHIKEKSNVSGTPNDQSDDGKNVDNQTISKMKLAHIEKRPTRVPRPPPKASGGGAAVSTNANPSNGVPSAPPIPPPPPGGPPPPPPPPRSLSRGAMDGDKVHRAPQLVEFYQTLMKREAKKDTSSLLVSSTSNASDARSNMIGEIENRSSFLLAVKADVETQGDFVMSLAAEVRAASFSDINDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLENKVSTFIDDPKLPCEAALKKMYSLLEKVEQSVYALLRTRDMAVSRYREFGIPVNWLLDSGVVGKIKLSSVQVAKKYMKRVASELDELSGPEKEPAREFLILQGVRFAFRVHQFAGGFDAESMKAFEDLRSRIQTSQAGEDNKPET 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1332 963 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 960 - -
Ssu2g1332 963 Coils Coil 294 321 - -
Ssu2g1332 963 Coils Coil 139 211 - -
Ssu2g1332 963 Coils Coil 36 56 - -
Ssu2g1332 963 Coils Coil 240 288 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 485 511 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 653 677 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 567 683 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 385 414 - -
Ssu2g1332 963 Coils Coil 538 558 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 438 455 - -
Ssu2g1332 963 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 1 960 IPR040265 -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 483 511 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 435 461 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 591 615 - -
Ssu2g1332 963 Coils Coil 105 135 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 350 414 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 352 368 - -
Ssu2g1332 963 MobiDBLite consensus disorder prediction 25 53 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1332 Ssu-Chr2 56554446 56559565 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1332 2 56554446 56559565 Ssu2g1332 2 56554446 56559565 ECH