Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1324 atgacgGTGTCGGCTGCCATTCCTACCATCACCAAGAACCGAATTTTGATCATTGGAGGAACTGGCTTCATGGGTCAGTTCATAACTAAGGCAAGTCTTGCCTTTGGGTACTCTACCTTCTTGCTCCTCAGGCCAGGGCCTGTCTCTCCTTCCAAGGCACCAATTGTCAAAACCTTTCAAGAGAAAGGTGCTAAGGTTATCCATGGTGCGATACGTGACAAGGAATTGATGGAGAAGATTTTGAAGGAGTGTGAGATAGACGTCGTCATTTCTCTTGTAGGAGGCGAACAAGTGATGGATCAGGTTATGTTGGTGGAGGCCATAAAATCTGTGAAGACTGTCAAGAGGTTTCTGCCATCAGAGTTTGGGCACGATGTGGACAGGGCAGCCCCTGTAGAGCCGGGACTCAGAATGTACGAAGAGAAGCGTTCAATTAGGCGTCTGACTGAGCAATATGGGGTTCCTTACACCAACATCTGCTGCAACTCCGTTGCTTCTTGGCCTTATTATGACAATTGTCATCCCACCAAGGTCCCCCCACCTTTGGATCGGTTTCAAATATATGGTGATGGCAACGTCAAAGCTTACTTTGTTGATGGCAATGATATTGGAAAGTTCACAATGAAGGCCATTGATGATATCAGAACACTGAACAAAAATGTTCATTTTCGACCCTCGGGCAACTGTTATTCCATCAACGACCTTGCTTCTTTATGGGAAAAGAAAATTGGTCGTACGATTCCCAGAGTCACCGTAACAGAGGATGATCTTCTTGCTAAAGCTGCAGAAAATTGTATACCTCAAAGTGTTGTAGCATCCTTCACTCATGATATTTTCTTCAAGGGTTGCCAAGTTAACTTCAGCACAGATGGACCTAATGATATTGAGATTAACATTCTCTATCCAGATGAAAAATTCCGATGCATGGAGGATTGTTACGAGGACTTTGTTCCCATGATCCATGACAAGATTCATGGAGGAACAAGTGAAGAGATTAAGGACTTAAAGCCTTTGGTAGAGACAGGACCAAATGAAGAAATTAAGGACTTAAAGCCTTTGGTAGAGGCAGTGCCAATAACAGCTATGGGCTAG 1092 0.4396 MTVSAAIPTITKNRILIIGGTGFMGQFITKASLAFGYSTFLLLRPGPVSPSKAPIVKTFQEKGAKVIHGAIRDKELMEKILKECEIDVVISLVGGEQVMDQVMLVEAIKSVKTVKRFLPSEFGHDVDRAAPVEPGLRMYEEKRSIRRLTEQYGVPYTNICCNSVASWPYYDNCHPTKVPPPLDRFQIYGDGNVKAYFVDGNDIGKFTMKAIDDIRTLNKNVHFRPSGNCYSINDLASLWEKKIGRTIPRVTVTEDDLLAKAAENCIPQSVVASFTHDIFFKGCQVNFSTDGPNDIEINILYPDEKFRCMEDCYEDFVPMIHDKIHGGTSEEIKDLKPLVETGPNEEIKDLKPLVEAVPITAMG 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1324 363 PANTHER LEUCANTHOCYANIDIN REDUCTASE 10 325 - -
Ssu2g1324 363 Gene3D - 14 303 - -
Ssu2g1324 363 Gene3D - 163 312 - -
Ssu2g1324 363 CDD PCBER_SDR_a 14 282 IPR045312 GO:0016491
Ssu2g1324 363 Pfam NmrA-like family 15 247 IPR008030 -
Ssu2g1324 363 PANTHER PINORESINOL REDUCTASE-RELATED 10 325 - -
Ssu2g1324 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 261 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1324 Ssu-Chr2 56323884 56328784 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1324 2 56323884 56328784 Ssu2g1324 2 56323884 56328784 ECH