Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1317 ATGTCTCTCTTTCTCACTCTCACTCTCACCCTGTTCTCGTGTATCctcttcaccaccaccaccaccaccactctGCCTCCTCCCTCTCCCTCATTCCCATACGGGCTCTCGTACCACATCGACTGCGGCAGTCCGACGAACAGCACCGACCAGTTCAACACGACGTGGCTCTCGGACCGCTACTTCAGCGGCGGCGCCGCCACGATCGTGTCGGAGCCGCTGCACTTCCGGCACGCGCACGAGAAGACCCTCCGCTTCTTCCCAATCTCCTCCGGCAAGAAGAACTGCTACACCGTCCCCTCCCTCCCCGCCTCCCGCTACCTCCTCCGCACCTTCGTCGTCTACGACAACTACGACGGCAAGTCCCACCCTCCCTCCTTCGACGTCTCCGTCGCCGCCACCGTCGTCTTCTCCTGGCGCTCCCCGTGGCCCCACTCCCTCGCCCGCGACTGGCGCCTACGCGGACCTCTTCGCCACATTCCCCTCCTCCGAAGCCCTAATCTGCTTCTACAGCCTCGCCACCGACCCGCCGGTTATCTCGTCGATCGAGCTCTTCGCCGCCGATCCGGCCTCGTACGACGCCGCCGCCGTCGGGGACAACGGAACGGCGGTGCTCGTCAACTACGGGCGACTCTCCTGCGGGTCCGACCAGTGGAGGCCGGGGTTCTCCAACGACTCCGACGCGTTCGGCCGGTCGTGGCAGTCCGACTCGGAGTTCCAGACCGGCCGGGGCAAGGTCCTCGCCGTGTCGACGCGGAGCGGCGTCAGCGGGACCGAGCAGAAGCCAAATTACTTCCCAGAGAAGCTGTACCAGACGGCGGCGACGACGACGGCGGCGGAGGAGGGGGGAGGGGTGTTGGAGTACGAGCTGAGCGTGGACGCGAAGCTGGACTACTTGGTGTGGCTGCATTTCGCGGAGATTGA 924 0.6353 MSLFLTLTLTLFSCILFTTTTTTTLPPPSPSFPYGLSYHIDCGSPTNSTDQFNTTWLSDRYFSGGAATIVSEPLHFRHAHEKTLRFFPISSGKKNCYTVPSLPASRYLLRTFVVYDNYDGKSHPPSFDVSVAATVVFSWRSPWPHSLARDWRLRGPLRHIPLLRSPNLLLQPRHRPAGYLVDRALRRRSGLVRRRRRRGQRNGGARQLRATLLRVRPVEAGVLQRLRRVRPVVAVRLGVPDRPGQGPRRVDAERRQRDRAEAKLLPREAVPDGGDDDGGGGGGRGVGVRAERGREAGLLGVAAFRGD 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1317 307 PANTHER CARBOHYDRATE-BINDING PROTEIN OF THE ER PROTEIN 26 150 - -
Ssu2g1317 307 MobiDBLite consensus disorder prediction 238 290 - -
Ssu2g1317 307 MobiDBLite consensus disorder prediction 246 274 - -
Ssu2g1317 307 Pfam Malectin-like domain 40 134 IPR024788 -
Ssu2g1317 307 PANTHER DI-GLUCOSE BINDING PROTEIN WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 26 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1317 Ssu-Chr2 56134025 56135035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1317 40 129 Receptor kinase-like Gene Family AT2G28990 36.458 4.38e-09 55.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1317 2 56134025 56135035 Ssu2g1317 2 56134025 56135035 ECH