Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1313 ATGGCGCTCACTGCTTCGCTCGCGCACAACGCATTTCTGAAATTCCCAACATCCTTTCATGGCGAAGCCTCACTGTCTTCTTCATCCTTTATGGGTTCTCCGCTTACACTCTCGCGCTCTTCGACCCTTCCCGCTTCGTCAATTCCGAGGAACCAATCACTTTCGAGAAAGCAATTCATGGTTTTTGCGAGGAAGATTACAGGGTTGGAGGAGGCCATGAATATCAGAAGAGAACGTGAACTTCAAGTTGTGACAAAGGTTAAGAAAAGGCCTCCATTAAGGCGTGGGAGAGTATCACCACGTCTCCCTGTCCCTGATCACATACCAAGGCCTCCTTATGTAGGCTCCAATATACTTCCTGAAATTGCAAGTGAGCATCAAATTCATGATTCTGAAGGTATAGCTAAAATGAGGGCTGCATGTGAGCTTGCAGCGCGTGTCTTAAACTTTGCAGGAACTTTGGTTAGGCCTTCCGTAACAACTAATGAGATTGATAAAGCAGTTCACCAGATGATTATTGACGCTGGTGCTTATCCCTCACCCCTTGGCTATGGTGGATTTCCGAAAAGTGTGTGCACATCTGTTAATGAGTGCATGTGCCATGGAATACCTGATTCTCGGCAGTTACAGAATGGTGATATTATTAACATTGATGTGACAGTCTACCTGGATGGATATCATGGAGACACATCAAAGACATTTTGTTGTGGGGAAGTTAGTGATAAACTGAAAACGCTTGTTAAGGTAAGTGAAGAGTGCTTGGAAAAGGGAATAGCTGCGTGCAAGGATGGTGCTCTTTTTAGGAAAATTGGAAAGAGAATCAGTGAGCATGCTGAAAAGTATGGCTATGGTGTAGTGGAGCGTTTTGTTGGGCATGGTGTGGGAACAGTGTTCCATTCTGAACCAATTATTTTACATCATCGCAATGACAAGTCAGGTTGCATGGTTGAAGGTCAAACATTTACAATTGAGCCTATTCTTTCCATGGGAAGCATTGATTCCGTTACATGGCCAGACAACTGGACGACAGTAACAGCTGATGGTAGTCCAGCTGCACAGTTTGAGCATACCATTTTGATAACTAGGACTGGAGCCGAAATTTTGACTACATGTTGA 1116 0.4435 MALTASLAHNAFLKFPTSFHGEASLSSSSFMGSPLTLSRSSTLPASSIPRNQSLSRKQFMVFARKITGLEEAMNIRRERELQVVTKVKKRPPLRRGRVSPRLPVPDHIPRPPYVGSNILPEIASEHQIHDSEGIAKMRAACELAARVLNFAGTLVRPSVTTNEIDKAVHQMIIDAGAYPSPLGYGGFPKSVCTSVNECMCHGIPDSRQLQNGDIINIDVTVYLDGYHGDTSKTFCCGEVSDKLKTLVKVSEECLEKGIAACKDGALFRKIGKRISEHAEKYGYGVVERFVGHGVGTVFHSEPIILHHRNDKSGCMVEGQTFTIEPILSMGSIDSVTWPDNWTTVTADGSPAAQFEHTILITRTGAEILTTC 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1313 371 PRINTS Methionine aminopeptidase-1 signature 313 325 IPR001714 -
Ssu2g1313 371 PRINTS Methionine aminopeptidase-1 signature 283 295 IPR001714 -
Ssu2g1313 371 PRINTS Methionine aminopeptidase-1 signature 191 204 IPR001714 -
Ssu2g1313 371 PRINTS Methionine aminopeptidase-1 signature 213 229 IPR001714 -
Ssu2g1313 371 PANTHER METHIONINE AMINOPEPTIDASE 16 370 - -
Ssu2g1313 371 TIGRFAM met_pdase_I: methionine aminopeptidase, type I 128 370 IPR002467 GO:0006508|GO:0070006
Ssu2g1313 371 SUPERFAMILY Creatinase/aminopeptidase 86 370 IPR036005 -
Ssu2g1313 371 Pfam Metallopeptidase family M24 136 361 IPR000994 -
Ssu2g1313 371 ProSitePatterns Methionine aminopeptidase subfamily 1 signature. 289 307 IPR002467 GO:0006508|GO:0070006
Ssu2g1313 371 PANTHER METHIONINE AMINOPEPTIDASE 16 370 - -
Ssu2g1313 371 Gene3D Creatinase/methionine aminopeptidase superfamily 91 371 IPR036005 -
Ssu2g1313 371 CDD MetAP1 134 369 IPR002467 GO:0006508|GO:0070006
Ssu2g1313 371 Hamap Methionine aminopeptidase [map]. 126 371 IPR002467 GO:0006508|GO:0070006
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1313 Ssu-Chr2 56025925 56041361 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1313 2 56025925 56041361 Ssu2g1313 2 56025925 56041361 ECH