Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1308 ATGATGCTGCATTTTGTACAGCCGTCAAAGGTGAAAACTAAGAAGATAGTGTTTGAGGATGCATATGCTGCCTGTGATTCTGCAACACTTGAGCATCTTAAGGAATTAAGCTCAAAGCGTAAAGCGATTGAAGATTCTATTAATGAGAGCAGCTTCATTACAGAAGCTATTGCAAAAGAAATGTCCGGAGGGTTGGAATCTCGCCATGAACAGGATATTCACAAAATAGAGCAGTATCTGCCATTACTGGAAAATTTGTTTCCCTATGCTGATGCAACAAACACCAATAACCAAATGGCTCAATGCACTGCGGCTCTTAAGATACGTTGGAGTAGTGCCCTGAGCACATCATCTTTCTTCAATTTCACAGGCCCCAAATTTTTCCAAATTGACAATTTGCGATTTGAGCTTGGTATGACCCTTTTTCTTTGTGGTGGAATCCTGCGAGAAAGGGCTTTAGAAGTTTTATCAACTGATTTGGTCCGATCTGCCACCATTTTCAGACAAGCTGCTGGCATTTATCATCACCTGGCTCAAGATGTTCTTCCCCCCTTACAGCATGAATTGCCACTAGAAAAGCCGCCGGAAGCTCTTGCTGCAGTATCCACCATTATGAGCCTCATTTGCTTGGCTGAGGCCCAGGCAGTAACCATAAGGAAGGCTGAAGAGAAAGGTACTTCTTCAAGTCTCCTGGCAAAGTTGCATCATGGCGTTACACTTTTTCTTGAAGAAGCTATTGGAATTTTTCGTACAGTTGTCACACAGAGCAAAGACATTTCATCACGCTTATTGGAATTTATGTATTTCTGCAAGTGTTTACATGAGTTAAAAGCTCAGCAATATCTTGCAGAAAGCCTGAAGGCTTGCGGTCAAATAGGGGCTGCTATTGGAGTTCTTTGTTCTGTGTTgattaatgtaaaaaagaagATACCAGGAGAAGAGCCTTGGAAATCTATTTACCAAAAGCAAATTCAAGATGCTTCTGAAGTGCTCAGAAAGTTTGTGCatgagaatgattttgtttgGCATGAGAAGATTCCTTCAGGAGATGAGTTACCCTTGCCTGAGGGTAATAAAATAGTCACTTTTATACCTTATAGTCCCAAAAGATGGGAAAGACAACTTTCTTTCAAGATGAAAGTGTAG 1146 0.4023 MMLHFVQPSKVKTKKIVFEDAYAACDSATLEHLKELSSKRKAIEDSINESSFITEAIAKEMSGGLESRHEQDIHKIEQYLPLLENLFPYADATNTNNQMAQCTAALKIRWSSALSTSSFFNFTGPKFFQIDNLRFELGMTLFLCGGILRERALEVLSTDLVRSATIFRQAAGIYHHLAQDVLPPLQHELPLEKPPEALAAVSTIMSLICLAEAQAVTIRKAEEKGTSSSLLAKLHHGVTLFLEEAIGIFRTVVTQSKDISSRLLEFMYFCKCLHELKAQQYLAESLKACGQIGAAIGVLCSVLINVKKKIPGEEPWKSIYQKQIQDASEVLRKFVHENDFVWHEKIPSGDELPLPEGNKIVTFIPYSPKRWERQLSFKMKV 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1308 381 SMART BRO1_2 4 373 IPR004328 -
Ssu2g1308 381 Pfam BRO1-like domain 73 366 IPR004328 -
Ssu2g1308 381 PANTHER PCD6 INTERACTING PROTEIN-RELATED 1 380 IPR045251 GO:0071985
Ssu2g1308 381 Gene3D alix/aip1 like domains 4 379 IPR038499 -
Ssu2g1308 381 CDD BRO1_Alix_like_2 6 368 - -
Ssu2g1308 381 ProSiteProfiles BRO1 domain profile. 1 381 IPR004328 -
Ssu2g1308 381 PANTHER BRO1 DOMAIN-CONTAINING PROTEIN BROX 1 380 - -
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1308 2 55915864 55919249 Ssu2g1308 2 55915864 55919249 ECH