Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1304 ATGGTCTCAGCTTCTTCTCCCCCTTCTAAGGAAATTCAATCAGATCAAAAATGGATGGAGAATGGTCCCTCTCGCAGGGCCAAATGGTGGTACTCAACTTTTCACACTGTGACAGCCATGATTGGTGCAGGTGTTCTCAGCCTGCCCTATGCCATGGCATATCTAGGATGGGTCCCTGGGACcttgatgttgttgttgagttGGTGCCTGACCTTAAACACAATGTGGCAAATGATCCAACTCCATGAGTGTGTTCCGGGAACCCGGTTCGATCGTTACATTGATCTTGGTAGACATGCTTTTGGACCAAAGTTAGGACCATGGATTGTGCTGCCTCAGCAACTGATTGTCCAAGTTGGATGTGATATTGTTTATATGGTCACTGGAGGGAAATGCCTAAAGAAGTTCATGGAGATTGCATGCACCAATTGCATACAACTCAAGCAGTCCTACTGGATTCTCATTTTTGGTGCCATCCATTTCTTTCTGTCTCAGCTTCCCAATTTCAATTCTGTTGCCGGGGTTTCTCTAGCAGCTGCTGTGATGTCACTAAGCTATTCAACCATATGCTGGGTGGCTTGCTTGGCTAGAGGTCGTGTTGACAATGTTAGCTATGCATACAAGCAAACCAGTTCAACTGACTTAATTTTCCGAATCTTCAATGCACTTGGTCAAATTTCATTTGCATTTGCTGGCCATGCAGTGGCCCTTGAAATTCAGGCCACAATTCCATCATCCACTGAGAAGCCCTCAAAGATACCAATGTGGAAAGGTGTGATCGGTGCCTATGTCATCAATGCTATATGCTATTTCCCAGTTGCACTTGTAGGATATTGGGCCTTTGGAAGAGATGTTGAGGATAATGTGCTTATGGCATTTGAAAAACCTGCATGGCTCATTGCCTCAGCTAACTTGATGGTGTTCATTCATGTTGTTGGTAGCTACCAGGTTTATGCTATGCCTGTTTTTGACCTGATCGAGAGGATGATGATCACAAGATTGAACTTCCCTCCAGGAGTAGCACTTAGACTTGTTGCTAGATCTGCTTTTGTAGCTTTTACATTATTCATTGGGGTCACATTCCCTTTCTTTGGTGATCTTCTGGGGTTCTTTGGTGGATTTGGTTTTGCTCCTACTTCATACTTTCTTCCTAGTATAATGTGGCTGATAATCAAGAAGCCAAAGAGGTTCAGCATCAATTGGTTCGTCAATTGGGCTTCAATATACATTGGAGTGTGCATTATGTTGGCATCTACAATTGGTGGCTTAAGGAATATCGTTGCTGATGCCTCTACTTATAAGTTTTACAcctaa 1314 0.4292 MVSASSPPSKEIQSDQKWMENGPSRRAKWWYSTFHTVTAMIGAGVLSLPYAMAYLGWVPGTLMLLLSWCLTLNTMWQMIQLHECVPGTRFDRYIDLGRHAFGPKLGPWIVLPQQLIVQVGCDIVYMVTGGKCLKKFMEIACTNCIQLKQSYWILIFGAIHFFLSQLPNFNSVAGVSLAAAVMSLSYSTICWVACLARGRVDNVSYAYKQTSSTDLIFRIFNALGQISFAFAGHAVALEIQATIPSSTEKPSKIPMWKGVIGAYVINAICYFPVALVGYWAFGRDVEDNVLMAFEKPAWLIASANLMVFIHVVGSYQVYAMPVFDLIERMMITRLNFPPGVALRLVARSAFVAFTLFIGVTFPFFGDLLGFFGGFGFAPTSYFLPSIMWLIIKKPKRFSINWFVNWASIYIGVCIMLASTIGGLRNIVADASTYKFYT 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1304 437 Pfam Transmembrane amino acid transporter protein 26 421 IPR013057 -
Ssu2g1304 437 PANTHER LYSINE HISTIDINE TRANSPORTER-LIKE 6 9 433 - -
Ssu2g1304 437 PANTHER OS05G0424000 PROTEIN-RELATED 9 433 - -
Ssu2g1304 437 MobiDBLite consensus disorder prediction 1 20 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1304 Ssu-Chr2 55760587 55763666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1304 9 436 Organic Solute Cotransporters AT1G25530 76.636 0.0 665
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1304 2 55760587 55763666 Ssu2g1304 2 55760587 55763666 ECH