Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1294 ATGGCAGCGAGAAACGGGTCGTTGAGGCAAATCTTCGCGGAGAGGAGCAAGGAGAGGCTCCTCTCGCGGAGGGACCTTCCGGACCTGAGGCTGAACGGCATCAGCGGCGTTCCGCGCGCGCTCTCGGATCGCGTGGCCAGGTTCTGCGACGGCGTGCGCGAGTTCTTCCTCGAGCTTCGCGACATGGCGCGCTCCGATCCGCGGAAAGTGGTGTTCGCCGCGAAAGCGGGGCTCTCGCTGGCCCTCGTTTCGCTGTTCATTTACATTAAGGAGGAACAGCTGAGCAAGTATTCCATCTGGGCTATCCTCACTGTCGTTGTCGTTTTCGAATTCAGCGTAGGTGCGACTTTGAACAAAGGGTTCAATCGTTCATTGGGAACGATTTCCGCTGGAGGGCTTGCACTGGGTATTGCTGAGTTGTCCGTTTTTTCCGGAAAGTTCGAGGAACTTATTATCGTACTTTGCATATTTATTGCAGGATTTTGTGCAAGCTATGTGAAGCTACTGCCTGCAATGAAGACATATGAATATGGCTTTCGTGTGTTTTTGTTGACATTTTGTATTGTGTTGGTATCTGGGAGAACTAGCAGGGAATTTTTCTCCACAGCCTTTTACAGATTAATTCTTATTGCTGTGGGTGCTGGCGTATGtttgtttgtaaatattttcatgtaCCCCATCTGGTCTGGGGAGGATCTGCATAAATTGGTGGTGAAAAATTTCAATGGAGTTGCTGCATCTTTAGAAGGCTGTGTTAATGGGTACCTGCAATGTGTTGCATATGAGAGGGTCCCTTCAAAAATTCTTGTTTATCAGGCCTCGGATGATCCACTTTACCGTGGCTATAGAGCAGCAGTTCAATCTTCAAGTCAAGAAGAGTCTTTGGTAGATTTTGCATTATGGGAGCCACCTCATGGTCCATACAAGACATTTAATTATCCTTGGAGAAGCTATGTTAAAGTCAGCGGAGCTTTAAGGCATTGTGCTTTCATGGTCATGGCAATGCATGGATGCATACTTTCAGAAATACAGGCACCCCCAGAAAAGAGGCTGGTTTTCAGTAATGAACTTCAGAAGGTTGGTACTGAAGGAGCTAAAGTATTGCGTCAACTAGGAAGCAAAGTGGAAAAGATGGAAAAGCTAAGCAATATAGACATACTCTTGAAAGTACATGATGCCGCTGAGCAATTGCAGATGAAGATTGACCAACAGTCATTCCTCCTAGTCAATTCAGAGAGCTGGCAGGCTGCAAAAAGGcctaaagaaattgaaaatcatGACAATTTGATTGATGTCAAAGACCATGAAAACAAACACTCTCTGATCTCTTCCCTCAGTGAAACAGGGGATAATTCAAGGCTCAACATAAGCATAGAGCATTCAGTGCCTGAATTGCACATTTCACAAAGCATGATGTGCAAGAAAATATCATGGCCACGTCTCTCGTTTTTAGGAGATAACCTGTTACTTGAGCAAGATTCCAAAGTATATGAAAGTGCCAGCTCTCTGTCTTTGGCAACATTTGCTTCCCTTTTAATAGAGTTTGTTGCAAGGCTTCAAAATCTTGTGGATGAATTCCAAGATCTCAGTGAGAAGGCCAATTTCAAAGACCGTTTGACCAACCGGTGTTAA 1632 0.4467 MAARNGSLRQIFAERSKERLLSRRDLPDLRLNGISGVPRALSDRVARFCDGVREFFLELRDMARSDPRKVVFAAKAGLSLALVSLFIYIKEEQLSKYSIWAILTVVVVFEFSVGATLNKGFNRSLGTISAGGLALGIAELSVFSGKFEELIIVLCIFIAGFCASYVKLLPAMKTYEYGFRVFLLTFCIVLVSGRTSREFFSTAFYRLILIAVGAGVCLFVNIFMYPIWSGEDLHKLVVKNFNGVAASLEGCVNGYLQCVAYERVPSKILVYQASDDPLYRGYRAAVQSSSQEESLVDFALWEPPHGPYKTFNYPWRSYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRLVFSNELQKVGTEGAKVLRQLGSKVEKMEKLSNIDILLKVHDAAEQLQMKIDQQSFLLVNSESWQAAKRPKEIENHDNLIDVKDHENKHSLISSLSETGDNSRLNISIEHSVPELHISQSMMCKKISWPRLSFLGDNLLLEQDSKVYESASSLSLATFASLLIEFVARLQNLVDEFQDLSEKANFKDRLTNRC 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1294 543 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 4-RELATED 6 539 - -
Ssu2g1294 543 Coils Coil 512 532 - -
Ssu2g1294 543 Coils Coil 536 543 - -
Ssu2g1294 543 Pfam Aluminium activated malate transporter 61 530 IPR020966 GO:0015743
Ssu2g1294 543 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 6 539 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1294 Ssu-Chr2 55589337 55595046 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1294 13 540 Miscellaneous Gene Families AT1G25480 61.982 0.0 648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1294 2 55589337 55595046 Ssu2g1294 2 55589337 55595046 ECH