Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1291 ATGGGTAAGAAGCTTGATGCTCTCCTTGGTAGAACCTTCAAGGCTGCAAAGCTCAAGGCAACTGTTAACCTTGCCATCTCACGCCTCGCTGTTCTCAAGAACCAGCGCCAGGCTCGCCTTAGACATGCCCGTTCTGATGTCCTTGAACTCCTCCAACTTGGTCACCATGATCGAGCCGCACTTCGAGTTGAGCATGTGATCAAGGATCAGAACATGTTGGATGTGTATGACAAGATTGAGGGATACTGCAACCTCTTGTTCGAAAGGGTCCACCTCATTGAGCAAGAAAGaGAATGTCCTGAGGAACTGAGGGAGGCAGCATCGGGATTACTCTATGCAGCTTCTAGGTGTGGAGATTTTCCAGAGATTCAAGAGATTCGCGCAGTTCTGACCACACGATTTGGCAAGGAGTTTGCTGCTCGTGCTATTGAGTTAAGGAATAACTGTGGAGTCCATCCTCAGTTGATACAAAAGATGTCTACAAGGATGCCAAGCTTGGAAAGCAGAATGAAGGTACTCAAAGACATTGCTTCTGAGAATGGTATTGTTCTGCAGCTTGAAGAAACTTCTGTTTCGGTTGAGGAACAATCCAATGTGGAAGAGCAAAACCAGCGTGAACctgagaaaaaggaagagaatgTAAGCATTTTGCCTAGTAGAGGAAAAGATGAGGAATTAACTGATTCCTTTAAGGCCGGGCAAAAGTACAAGGATGTAGCTGCTGCAGCCCAAGCAGCTTTTGAGTCAGCAGCATATGCTGCAGCTGCTGCAAGAGCGGCACTGGAACTGTCCCGATCTGAATCACATGATCCTGATGATCATGATAGTCCAAGCCTCCAACCAAGAAAAGTGGAGGATGGACATGATAATATGAGACCTCAactggaagaaaaagaaatcctCAGTGAAACTCAAAGAGAAGATTTGAACAAGGACATAGATGAGTTACAAAAGCCAAAAGACATTATAAGTTGCAATTTAACTGATGAGATTTTGAAGGGGGCTACTGTCTCAGTGGATGCTGAAATTGAGGCTGATTCTTTGGAAAAGGAAGTAGTTTTTGATGATAGTGATGATGAGactgataataaacaaaacagAAATCAATCTTCTAAGCAGACATCTTTAGGGTATGGTGCTGGTATAGAGGTTGGTTCAGGTTCTAGGCAACTAGTAATAAATACAGTGCCAGGATCCAAGATGCAGAGTGCGCCTCAGTTGGATTTGCAGAAGAGGCCAATTTCTGTGAGGACTAGATGA 1260 0.4278 MGKKLDALLGRTFKAAKLKATVNLAISRLAVLKNQRQARLRHARSDVLELLQLGHHDRAALRVEHVIKDQNMLDVYDKIEGYCNLLFERVHLIEQERECPEELREAASGLLYAASRCGDFPEIQEIRAVLTTRFGKEFAARAIELRNNCGVHPQLIQKMSTRMPSLESRMKVLKDIASENGIVLQLEETSVSVEEQSNVEEQNQREPEKKEENVSILPSRGKDEELTDSFKAGQKYKDVAAAAQAAFESAAYAAAAARAALELSRSESHDPDDHDSPSLQPRKVEDGHDNMRPQLEEKEILSETQREDLNKDIDELQKPKDIISCNLTDEILKGATVSVDAEIEADSLEKEVVFDDSDDETDNKQNRNQSSKQTSLGYGAGIEVGSGSRQLVINTVPGSKMQSAPQLDLQKRPISVRTR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1291 419 MobiDBLite consensus disorder prediction 188 227 - -
Ssu2g1291 419 MobiDBLite consensus disorder prediction 346 382 - -
Ssu2g1291 419 PANTHER REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN 8 419 - -
Ssu2g1291 419 MobiDBLite consensus disorder prediction 395 419 - -
Ssu2g1291 419 Pfam Regulator of Vps4 activity in the MVB pathway 19 182 IPR005061 GO:0015031
Ssu2g1291 419 MobiDBLite consensus disorder prediction 395 409 - -
Ssu2g1291 419 PANTHER IST1 FAMILY MEMBER 8 419 IPR005061 GO:0015031
Ssu2g1291 419 MobiDBLite consensus disorder prediction 199 227 - -
Ssu2g1291 419 MobiDBLite consensus disorder prediction 263 304 - -
Ssu2g1291 419 Gene3D - 6 194 IPR042277 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1291 Ssu-Chr2 55560435 55562281 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1291 2 55560435 55562281 Ssu2g1291 2 55560435 55562281 ECH