Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1283 atggagaagaaagaaaatcatGCTACAAGGAAAAAGGGAGGGCTTATCACAATGCCCTTCATCTTTGcTAATGAGGTTTGTGAGAAGCTGGCTGTGGTGGGTTTCAACACAAACATGATTAGCTACTTGACAACACAGCTTCACATGCCATTAACCAAAGCAGCTAACACCCTCACTAACTTTAGTGGAACTGCAAGCTTGACACCACTGCTTGGTGCTTTCATTGCTGACTCTTATGCCGGAAAGTTCTGGACTGTCACCGGTGCTTCCATTATATACCAGATAGGGATGATTAGTTTGACATTATCAGCAGTGCTTCCACAGTTTAGACCACCTCCTTGCAAAGGTGAAGAGGTGTGCCAAGAAGCAAGTGCAGGACAGCTGGCAGTGCTCTATGTGTCACTACTCCTTGGGGCTCTCGGGTCGGGCGGGATCCGACCCTGCATCGTCGCATTCGGGGCGGACCAGTTTGATGAATCGGATTCGAATCAGACAAGAAGGACATGGACTTACTTCAATTGGTACTATTTTGTCATGGGTGTAGCTATTCTCGTGGCTGTGACGGTTTTGGTTTATATTCAAGATAACATTGGATGGGGATTGGGCCTTGGAATCCCCACCGTTGCAATGTTCATCTCAATTATTGCCTTCATTGTTGGGTACCCACTTTACCGAAACTTGAACCCGGCTGGGAGCCCGTTTACCCGATTGGCACAGGTGGCTGTGGCTGCAATTCATAAGAGAAAGATGCCAAATGTGTCACACCCTAGTTTACTGTACCAAAATGATGAACTAGATGCCTCTATATCTTTGGGAGGGAAGCTTCTTCACAGTGAACAGATGAAATTTTTGGACAAGGCAGCAATTGTGACAAAAGAAGATGACAATGGCAAAACACCCAACTTATGGAGGCTAAACACAGTTCATAGAGTGGAGGAATTGAAGTCCATAATTAGGATGGGCCCAATATGGGCCTCAGGCATTCTTCTCATCACAGCCTATGCCCAACAAAGCACATTCTCTCTCCAACAAGCCAAAACCATGGACAGACACATAACCAAAACCTTTCAAATCCCAGCAGGGTCCATGTCTGTCTTCACCATCCTCACCATGCTCACCACCACTGTGTTTTATGACCGAGTCTTCATTAAAGTGGCCCGTAGATTCACTGGGCTGGATCGTGGCATAAGCTTCCTTCACAGGATGGGTATTGGCTTTGTGATCTCAACCTTGGCCACATTGGTTGCTGGGTTTGttgaaatgaagagaaagaaggcaGCTCTAGCCCATGGGCTTTTTGACCACCCACTTGCCACAATCCCAATCTCAGTGTTTTGGCTTGTGCCACAATACAGTCTTCATGGAATGGCTGAGGCCTTTATGTCCATTGGAcacttagaatttttctatgatCAGGCCCCAGAGAGTATGAGGAGCACTGCCATGGCACTCTTTTGGACTGCAATTTCTGCTGGGAACTATGTAAGTACACTTTTGGTTACTTTGGTCCACAAGTTCAGTGCTGGGCCTAATGGGTCAAATTGGCTACCTGATAACAACCTCAACAAGGGGAAGTTGGAGTACTTTTACTGGCTCATCACAATGCTGCAATTTATCAATCTTATTTACTACTTGGTTTGCGCCAAGTTGTACACTTACAAGCCAATTCAGGTCCACGACAAAGAGGATAGCAATTCGGAAGGGAACCAAATTGAGCTTGTGACGACAGTTTAA 1734 0.4469 MEKKENHATRKKGGLITMPFIFANEVCEKLAVVGFNTNMISYLTTQLHMPLTKAANTLTNFSGTASLTPLLGAFIADSYAGKFWTVTGASIIYQIGMISLTLSAVLPQFRPPPCKGEEVCQEASAGQLAVLYVSLLLGALGSGGIRPCIVAFGADQFDESDSNQTRRTWTYFNWYYFVMGVAILVAVTVLVYIQDNIGWGLGLGIPTVAMFISIIAFIVGYPLYRNLNPAGSPFTRLAQVAVAAIHKRKMPNVSHPSLLYQNDELDASISLGGKLLHSEQMKFLDKAAIVTKEDDNGKTPNLWRLNTVHRVEELKSIIRMGPIWASGILLITAYAQQSTFSLQQAKTMDRHITKTFQIPAGSMSVFTILTMLTTTVFYDRVFIKVARRFTGLDRGISFLHRMGIGFVISTLATLVAGFVEMKRKKAALAHGLFDHPLATIPISVFWLVPQYSLHGMAEAFMSIGHLEFFYDQAPESMRSTAMALFWTAISAGNYVSTLLVTLVHKFSAGPNGSNWLPDNNLNKGKLEYFYWLITMLQFINLIYYLVCAKLYTYKPIQVHDKEDSNSEGNQIELVTTV 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1283 577 PANTHER BNAA07G24560D PROTEIN 8 562 - -
Ssu2g1283 577 Pfam POT family 83 515 IPR000109 GO:0016020|GO:0022857|GO:0055085
Ssu2g1283 577 Gene3D MFS general substrate transporter like domains 1 560 IPR036259 -
Ssu2g1283 577 SUPERFAMILY MFS general substrate transporter 8 550 IPR036259 -
Ssu2g1283 577 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 8 562 IPR000109 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1283 Ssu-Chr2 55379329 55384342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1283 23 573 Organic Solute Cotransporters AT1G68570 77.076 0.0 882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1283 2 55379329 55384342 Ssu2g1283 2 55379329 55384342 ECH