Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1254 ATGAAGAGCTCAAATAATCAACATCCATTAAATTCTGTTTCAAAGCATTATCATCTCCAGCTTGTTCGTTTCCTTCCCTATCTCCTACTTTTGGCCTTTGGTGTAACCATTGGAGTCATCATCAGTTTCTATCTTAAAAGCTGTAGCTTCAGTCTACAGTTCACTCAGTTCTCACGCTCTTCATCACGGAATGCCCCCCCACCAATTGAAAAACCAAAAGTATCGAATTCTACCCTCAGACAAGTGGGATTAAAAGAGTTTATTCAGCCTTCTAATGTTGTGCATGATATGAGTGATGAAGAACTGTTATGGAGAGCTTCAATGACCCCTAAGATCCGTGAATACCCCTTTGATCGCGTTCCCAAGGTGGCCTTCATGTTCTTGGTAAGGGGTCCTGTGCCTTTGGCTCCTTTTTGGAACAAGTTCTTCACAGGGCATGAAGGGTACTACTCTATTTACGTGCATTCCGATCCTTCTTACAATGGATCAGACCCGGAGAGTTCAGCGTTTCATGGAAGGAGAATTCCTAGTAAGAAAGTGGAATGGGGCGATTTCAACCTGATTGAAGCAGAGCGTCGCCTTCTGGCCAATGCCCTTCTCGATTTCTCAAACCAACGCTTTGTTCTCATATCAGAATCCTGCGTCCCTCTCTTCAACTTCTCAACAATCtactcttatttaatgaactccACCCAAAGCTATGTGATGGCTTACGATGAGGATAGTCAAGTTGGACGTGGACGTTACAACATCCACATGTCCCCTATGATCACCCTCCAACAGTGGAGAAAAGGGTCTCAGTGGTTTGAAATGGACAGAGGCCTTGCACTAGAAGTGGTGTCAGACAGAACCTACTTCCCAGTTTTTGGCGAGTACTGCAGAGGATCATGTTATGCTGATGAACATTACTTACCAACTTTTGTTAGCATCATGTTTTGGGAGAAGAACTCAAACAGGAGTTTGACTTGGGTCGACTGGTCAAAGGGTGGCCCACACCCAGCTAAATATGTCAGACCAGAGGTTACTGTGGCCTTCTTGAATAATTTGAGGAACCAGACATGTGAGTATAATGGAAAAGACACAAATGTTTGTTTTCTGTTTGCAAGGAAATTCTTGCCCACTTCGTTGACAAGGCTCATGAAGTTTTCTCGACGGGTCATGCACATATAA 1170 0.4325 MKSSNNQHPLNSVSKHYHLQLVRFLPYLLLLAFGVTIGVIISFYLKSCSFSLQFTQFSRSSSRNAPPPIEKPKVSNSTLRQVGLKEFIQPSNVVHDMSDEELLWRASMTPKIREYPFDRVPKVAFMFLVRGPVPLAPFWNKFFTGHEGYYSIYVHSDPSYNGSDPESSAFHGRRIPSKKVEWGDFNLIEAERRLLANALLDFSNQRFVLISESCVPLFNFSTIYSYLMNSTQSYVMAYDEDSQVGRGRYNIHMSPMITLQQWRKGSQWFEMDRGLALEVVSDRTYFPVFGEYCRGSCYADEHYLPTFVSIMFWEKNSNRSLTWVDWSKGGPHPAKYVRPEVTVAFLNNLRNQTCEYNGKDTNVCFLFARKFLPTSLTRLMKFSRRVMHI 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1254 389 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 1 66 IPR044174 GO:0016757
Ssu2g1254 389 PANTHER CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN-RELATED 77 389 IPR044174 GO:0016757
Ssu2g1254 389 Pfam Core-2/I-Branching enzyme 123 349 IPR003406 GO:0016020|GO:0016757
Ssu2g1254 389 PANTHER CORE-2/I-BRANCHING ENZYME 77 389 - -
Ssu2g1254 389 PANTHER CORE-2/I-BRANCHING ENZYME 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1254 Ssu-Chr2 54376089 54379423 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1254 2 54376089 54379423 Ssu2g1254 2 54376089 54379423 ECH