Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g1227 ATGGGCGAAGCTTTGGTTGCTAGAATGAAGAAATGTAGCATAGTGAATGGTGGCAAATATGTCTCCATACATCTTCGTTTTGAAGAGGATATGGTTGCTTTCTCTTGCTGTGTTTTTGATTGTGGAAAACAGGAGAGAGAAGACATGATTGCTGCAAGAGAAAGAGGTTGGAAAGGGAAATTTACAAAACCTGGACGAGTTATACCTCCTGGAGCAATTAGGATCAATGGAAAGTGTCCACTCACTCCATTAGAGGTTGGTCTTATGTTGAGGGGAATGGGTTTCACAAAGAACACATCTATCTATTTGGCATctggaaaaatatataatgctGAGAAAACAATGGCCCCACTACGGGAAATGTTTCCTAATTTGCATACTAAGGAGACTCTAGCATCCAAAGAGGAACTTGCTCCATTTAAGAATTATTCTTCCAGGATGGCTGCTATAGACTACACTGTTTGTCTTCATAGTGAAGTGTTTGTCACAACTCAGGGTGGTAATTTCCCCCATTTTCTACTGGGCCACAGAAGATACTTGTTTGGTGGACACTCTTAA 558 0.3978 MGEALVARMKKCSIVNGGKYVSIHLRFEEDMVAFSCCVFDCGKQEREDMIAARERGWKGKFTKPGRVIPPGAIRINGKCPLTPLEVGLMLRGMGFTKNTSIYLASGKIYNAEKTMAPLREMFPNLHTKETLASKEELAPFKNYSSRMAAIDYTVCLHSEVFVTTQGGNFPHFLLGHRRYLFGGHS 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g1227 185 Pfam GDP-fucose protein O-fucosyltransferase 2 180 IPR019378 -
Ssu2g1227 185 PANTHER PROTEIN ESMERALDA 1 1 185 - -
Ssu2g1227 185 PANTHER - 1 185 IPR024709 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g1227 Ssu-Chr2 53750296 53755599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu2g1227 1 184 Miscellaneous Gene Families AT1G22460 42.473 2.07e-40 142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g1227 2 53750296 53755599 Ssu2g1227 2 53750296 53755599 ECH